Variant report
| Variant | rs55956517 |
|---|---|
| Chromosome Location | chr14:78288359-78288360 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr14:78267200-78288800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 2 | chr14:78267200-78304200 | Weak transcription | HSMMtube | muscle |
| 3 | chr14:78267200-78310800 | Weak transcription | Esophagus | oesophagus |
| 4 | chr14:78270800-78288400 | Weak transcription | Fetal Intestine Small | intestine |
| 5 | chr14:78270800-78288800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 6 | chr14:78274800-78316600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 7 | chr14:78282800-78288600 | Weak transcription | Pancreas | Pancrea |
| 8 | chr14:78283000-78293400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 9 | chr14:78283200-78301800 | Weak transcription | Small Intestine | intestine |
| 10 | chr14:78283400-78289200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 11 | chr14:78283600-78311000 | Weak transcription | Hela-S3 | cervix |
| 12 | chr14:78283800-78288800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 13 | chr14:78283800-78288800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 14 | chr14:78283800-78297200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 15 | chr14:78284000-78288600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 16 | chr14:78284000-78289200 | Weak transcription | NHEK | skin |
| 17 | chr14:78284000-78292200 | Weak transcription | Stomach Mucosa | stomach |
| 18 | chr14:78284000-78299400 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 19 | chr14:78284200-78289000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 20 | chr14:78284200-78298000 | Weak transcription | HepG2 | liver |
| 21 | chr14:78284200-78309400 | Weak transcription | Brain Germinal Matrix | brain |
| 22 | chr14:78284200-78312600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 23 | chr14:78284600-78288600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 24 | chr14:78284600-78289400 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 25 | chr14:78284800-78288800 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 26 | chr14:78284800-78289600 | Strong transcription | Adipose Nuclei | Adipose |
| 27 | chr14:78284800-78289800 | Strong transcription | Fetal Muscle Leg | muscle |
| 28 | chr14:78284800-78291600 | Weak transcription | Fetal Heart | heart |
| 29 | chr14:78284800-78300800 | Weak transcription | Fetal Brain Male | brain |
| 30 | chr14:78284800-78305200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 31 | chr14:78285000-78289600 | Strong transcription | Brain Hippocampus Middle | brain |
| 32 | chr14:78285200-78289600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 33 | chr14:78285200-78290200 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 34 | chr14:78285200-78293200 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 35 | chr14:78285400-78289200 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 36 | chr14:78285400-78289400 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 37 | chr14:78285400-78289400 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 38 | chr14:78285400-78289600 | Strong transcription | Liver | Liver |
| 39 | chr14:78285400-78289600 | Strong transcription | Fetal Muscle Trunk | muscle |
| 40 | chr14:78285400-78289600 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 41 | chr14:78285400-78289800 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 42 | chr14:78285800-78305800 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 43 | chr14:78286200-78289000 | Weak transcription | Fetal Kidney | kidney |
| 44 | chr14:78286200-78289000 | Weak transcription | Psoas Muscle | Psoas |
| 45 | chr14:78286200-78299000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 46 | chr14:78286200-78301800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 47 | chr14:78286200-78303000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 48 | chr14:78286400-78288400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 49 | chr14:78286400-78288400 | Weak transcription | Brain Anterior Caudate | brain |
| 50 | chr14:78286400-78288600 | Weak transcription | Brain Cingulate Gyrus | brain |
