Variant report

Variant	rs55966095
Chromosome Location	chr6:143447815-143447816
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs17072255	1.00[EUR][1000 genomes]
rs58657197	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59260853	1.00[EUR][1000 genomes]
rs59866066	1.00[EUR][1000 genomes]
rs73777879	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9390057	1.00[EUR][1000 genomes]
rs9403446	1.00[EUR][1000 genomes]
rs9496527	1.00[EUR][1000 genomes]

Chromatin state (count:50 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143408600-143452600	Weak transcription	Right Ventricle	heart
2	chr6:143427600-143451800	Weak transcription	Left Ventricle	heart
3	chr6:143428400-143452000	Weak transcription	Duodenum Smooth Muscle	Duodenum
4	chr6:143432000-143452000	Weak transcription	Ovary	ovary
5	chr6:143432800-143450800	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr6:143433000-143448400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr6:143437000-143452000	Weak transcription	Stomach Smooth Muscle	stomach
8	chr6:143440800-143452800	Weak transcription	Pancreas	Pancrea
9	chr6:143441000-143451800	Weak transcription	HepG2	liver
10	chr6:143441200-143479000	Weak transcription	NHLF	lung
11	chr6:143442600-143450000	Weak transcription	Fetal Intestine Small	intestine
12	chr6:143442600-143450400	Weak transcription	HUES64 Cell Line	embryonic stem cell
13	chr6:143442600-143451000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr6:143442600-143451600	Weak transcription	Duodenum Mucosa	Duodenum
15	chr6:143442800-143450600	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr6:143442800-143450800	Weak transcription	HUES6 Cell Line	embryonic stem cell
17	chr6:143442800-143452000	Weak transcription	Colon Smooth Muscle	Colon
18	chr6:143442800-143452000	Weak transcription	NHEK	skin
19	chr6:143443000-143451800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
20	chr6:143443200-143452000	Weak transcription	Primary T cells from cord blood	blood
21	chr6:143443600-143462200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr6:143443800-143450000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr6:143443800-143452600	Weak transcription	Brain Angular Gyrus	brain
24	chr6:143443800-143498800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr6:143444000-143449000	Strong transcription	Fetal Intestine Large	intestine
26	chr6:143444000-143449400	Weak transcription	Fetal Stomach	stomach
27	chr6:143444000-143449800	Enhancers	NHDF-Ad	bronchial
28	chr6:143444000-143451800	Weak transcription	Brain Cingulate Gyrus	brain
29	chr6:143444200-143452000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
30	chr6:143444200-143452000	Weak transcription	Brain Inferior Temporal Lobe	brain
31	chr6:143444600-143451000	Weak transcription	Adipose Nuclei	Adipose
32	chr6:143444600-143516400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr6:143445400-143451600	Strong transcription	Liver	Liver
34	chr6:143445600-143449400	Weak transcription	Esophagus	oesophagus
35	chr6:143445800-143451800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
36	chr6:143445800-143452000	Weak transcription	Fetal Heart	heart
37	chr6:143445800-143452000	Weak transcription	K562	blood
38	chr6:143445800-143452600	Weak transcription	Aorta	Aorta
39	chr6:143445800-143479200	Weak transcription	Lung	lung
40	chr6:143446000-143450200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
41	chr6:143446000-143451400	Weak transcription	Fetal Brain Male	brain
42	chr6:143446400-143448000	Flanking Active TSS	Osteobl	bone
43	chr6:143446400-143451600	Weak transcription	Fetal Brain Female	brain
44	chr6:143446600-143448000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr6:143447200-143451600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr6:143447600-143448000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr6:143447800-143448000	Active TSS	NH-A	brain
48	chr6:143447800-143452000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
49	chr6:143447800-143452000	Weak transcription	HMEC	breast
50	chr6:143447800-143452000	Weak transcription	HSMM	muscle

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