The 2.0 version of rSNPBase

Variant report

Variant rs55971519
Chromosome Location chr6:144140385-144140386
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:144111000-144143800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:144111400-144140400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr6:144111600-144149000 Weak transcription Right Ventricle heart
4 chr6:144122200-144140400 Weak transcription Fetal Heart heart
5 chr6:144122200-144140600 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr6:144122200-144142600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr6:144122200-144143400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr6:144122200-144144000 Weak transcription Colon Smooth Muscle Colon
9 chr6:144122200-144146800 Weak transcription Rectal Smooth Muscle rectum
10 chr6:144122200-144147400 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr6:144122200-144147600 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr6:144122200-144147800 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr6:144122200-144155000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr6:144122200-144163600 Weak transcription Colonic Mucosa Colon
15 chr6:144122200-144163600 Weak transcription Fetal Kidney kidney
16 chr6:144123600-144150000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr6:144125600-144163600 Weak transcription Psoas Muscle Psoas
18 chr6:144125800-144143800 Weak transcription Ovary ovary
19 chr6:144125800-144163600 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr6:144127800-144143600 Weak transcription NH-A brain
21 chr6:144127800-144143600 Weak transcription NHLF lung
22 chr6:144127800-144143800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr6:144128200-144144000 Weak transcription HSMM muscle
24 chr6:144128800-144163600 Weak transcription HSMMtube muscle
25 chr6:144129200-144140600 Weak transcription Stomach Smooth Muscle stomach
26 chr6:144129200-144140800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr6:144129200-144143800 Weak transcription NHEK skin
28 chr6:144129200-144144800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr6:144129200-144146200 Weak transcription H9 Cell Line embryonic stem cell
30 chr6:144129200-144147200 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr6:144129200-144150000 Weak transcription Primary T cells from cord blood blood
32 chr6:144129200-144152800 Weak transcription Primary B cells from cord blood blood
33 chr6:144129200-144159200 Weak transcription HepG2 liver
34 chr6:144129200-144163600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr6:144129200-144163600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr6:144129600-144144800 Weak transcription Left Ventricle heart
37 chr6:144129600-144163600 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr6:144129800-144144600 Weak transcription Primary monocytes fromperipheralblood blood
39 chr6:144130000-144149600 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr6:144130000-144150800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr6:144130200-144140400 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr6:144130200-144140400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr6:144130200-144141400 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr6:144130200-144143800 Weak transcription Muscle Satellite Cultured Cells --
45 chr6:144130200-144144000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr6:144130200-144147200 Weak transcription Stomach Mucosa stomach
47 chr6:144130200-144150200 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr6:144130200-144150800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr6:144130200-144163400 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr6:144130200-144163800 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015