Variant report

Variant rs55977259
Chromosome Location chr5:52037582-52037583
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:52029600-52039200 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr5:52033200-52039400 Enhancers Primary T cells from cord blood blood
3 chr5:52034400-52038400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr5:52034400-52039200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr5:52034400-52040200 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr5:52034600-52037600 Weak transcription HUVEC blood vessel
7 chr5:52034600-52037800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr5:52034600-52038200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr5:52035000-52037600 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr5:52035000-52038200 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr5:52035200-52038200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr5:52035800-52037800 Weak transcription Fetal Lung lung
13 chr5:52036600-52039200 Weak transcription Duodenum Mucosa Duodenum
14 chr5:52036600-52040000 Weak transcription Fetal Stomach stomach
15 chr5:52036800-52039000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr5:52037000-52041600 Enhancers Primary T helper cells fromperipheralblood blood
17 chr5:52037000-52042000 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr5:52037200-52041600 Enhancers Primary T killer memory cells from peripheral blood blood
19 chr5:52037200-52041600 Enhancers Fetal Adrenal Gland Adrenal Gland
20 chr5:52037200-52042000 Enhancers Primary T helper cells PMA-I stimulated --
21 chr5:52037400-52037600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr5:52037400-52037600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr5:52037400-52038000 Enhancers Primary T cells fromperipheralblood blood
24 chr5:52037400-52038000 Enhancers Aorta Aorta
25 chr5:52037400-52038000 Enhancers Fetal Thymus thymus
26 chr5:52037400-52038000 Enhancers Spleen Spleen
27 chr5:52037400-52039600 Enhancers Small Intestine intestine
28 chr5:52037400-52041000 Enhancers Dnd41 blood
29 chr5:52037400-52042200 Enhancers Primary T helper naive cells fromperipheralblood blood

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