Variant report
| Variant | rs559805 |
|---|---|
| Chromosome Location | chr15:43806988-43806989 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:43803600-43808400 | Weak transcription | Psoas Muscle | Psoas |
| 2 | chr15:43803600-43809400 | Weak transcription | Aorta | Aorta |
| 3 | chr15:43803600-43809400 | Weak transcription | Lung | lung |
| 4 | chr15:43803800-43808400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 5 | chr15:43803800-43808400 | Weak transcription | Esophagus | oesophagus |
| 6 | chr15:43803800-43808600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 7 | chr15:43803800-43809000 | Weak transcription | Right Atrium | heart |
| 8 | chr15:43804000-43808000 | Weak transcription | Ovary | ovary |
| 9 | chr15:43804000-43808000 | Weak transcription | Right Ventricle | heart |
| 10 | chr15:43804000-43808000 | Weak transcription | Spleen | Spleen |
| 11 | chr15:43804000-43808200 | Weak transcription | Fetal Heart | heart |
| 12 | chr15:43804000-43808200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 13 | chr15:43804000-43809200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 14 | chr15:43804000-43809200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 15 | chr15:43804000-43810000 | Weak transcription | A549 | lung |
| 16 | chr15:43804200-43808200 | Weak transcription | Fetal Brain Female | brain |
| 17 | chr15:43804200-43808400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 18 | chr15:43804200-43808400 | Weak transcription | Hela-S3 | cervix |
| 19 | chr15:43804200-43809400 | Enhancers | Fetal Thymus | thymus |
| 20 | chr15:43804400-43808000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 21 | chr15:43804400-43808200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 22 | chr15:43804400-43809200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 23 | chr15:43805000-43807000 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 24 | chr15:43805000-43808200 | Enhancers | Fetal Muscle Leg | muscle |
| 25 | chr15:43805200-43808400 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 26 | chr15:43805400-43807000 | Enhancers | Brain Substantia Nigra | brain |
| 27 | chr15:43805600-43807000 | Enhancers | Osteobl | bone |
| 28 | chr15:43805600-43807200 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 29 | chr15:43805600-43807200 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 30 | chr15:43805600-43808200 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 31 | chr15:43805600-43808200 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 32 | chr15:43805600-43808600 | Enhancers | Thymus | Thymus |
| 33 | chr15:43805800-43807000 | Enhancers | Adipose Nuclei | Adipose |
| 34 | chr15:43805800-43807200 | Enhancers | Primary hematopoietic stem cells | blood |
| 35 | chr15:43805800-43808200 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 36 | chr15:43805800-43808400 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 37 | chr15:43805800-43809000 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
| 38 | chr15:43805800-43809000 | Enhancers | Fetal Stomach | stomach |
| 39 | chr15:43806000-43807000 | Enhancers | Primary T cells from cord blood | blood |
| 40 | chr15:43806000-43807000 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 41 | chr15:43806200-43807000 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 42 | chr15:43806200-43807000 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 43 | chr15:43806200-43807000 | Flanking Active TSS | Brain Cingulate Gyrus | brain |
| 44 | chr15:43806200-43807000 | Flanking Active TSS | Brain Hippocampus Middle | brain |
| 45 | chr15:43806200-43808200 | Enhancers | Colon Smooth Muscle | Colon |
| 46 | chr15:43806200-43808400 | Enhancers | Fetal Muscle Trunk | muscle |
| 47 | chr15:43806600-43807000 | Flanking Active TSS | Brain Anterior Caudate | brain |
| 48 | chr15:43806600-43807000 | Flanking Active TSS | HSMMtube | muscle |
| 49 | chr15:43806600-43807200 | Enhancers | Duodenum Smooth Muscle | Duodenum |
| 50 | chr15:43806600-43808000 | Weak transcription | Fetal Brain Male | brain |
