Variant report

Variant rs560028403
Chromosome Location chr6:33718341-33718342
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:33712400-33719600 Weak transcription Gastric stomach
2 chr6:33714200-33718400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr6:33714200-33719200 Weak transcription Pancreas Pancrea
4 chr6:33714800-33718400 Weak transcription Esophagus oesophagus
5 chr6:33714800-33718400 Weak transcription Placenta Amnion Placenta Amnion
6 chr6:33714800-33718400 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr6:33714800-33718600 Weak transcription Colonic Mucosa Colon
8 chr6:33714800-33718800 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr6:33714800-33719200 Weak transcription Lung lung
10 chr6:33714800-33720600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr6:33714800-33721000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr6:33714800-33722600 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr6:33715000-33718600 Weak transcription Spleen Spleen
14 chr6:33715000-33718600 Weak transcription HMEC breast
15 chr6:33715000-33720600 Enhancers Fetal Muscle Leg muscle
16 chr6:33715200-33718400 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr6:33715200-33737800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr6:33715400-33718600 Weak transcription Right Ventricle heart
19 chr6:33715600-33718600 Weak transcription Fetal Intestine Small intestine
20 chr6:33715600-33719400 Weak transcription Left Ventricle heart
21 chr6:33715600-33719600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr6:33715600-33729400 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr6:33716200-33720400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr6:33716400-33720600 Enhancers Placenta Placenta
25 chr6:33716600-33720600 Enhancers Skeletal Muscle Female skeletal muscle
26 chr6:33717000-33718400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr6:33717000-33718400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr6:33717000-33723000 Weak transcription H1 Cell Line embryonic stem cell
29 chr6:33717200-33718400 Weak transcription Fetal Thymus thymus
30 chr6:33717600-33718600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr6:33717600-33718600 Enhancers Muscle Satellite Cultured Cells --
32 chr6:33717600-33719200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
33 chr6:33717600-33720400 Enhancers HSMMtube muscle
34 chr6:33717800-33719600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr6:33718000-33718400 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr6:33718000-33718400 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
37 chr6:33718000-33719800 Enhancers Liver Liver
38 chr6:33718000-33720200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr6:33718000-33720200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr6:33718000-33721000 Enhancers Stomach Mucosa stomach
41 chr6:33718200-33718400 Bivalent Enhancer HepG2 liver
42 chr6:33718200-33719000 Enhancers Fetal Muscle Trunk muscle
43 chr6:33718200-33719200 Flanking Active TSS HSMM muscle
44 chr6:33718200-33719400 Weak transcription Psoas Muscle Psoas
45 chr6:33718200-33719600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr6:33718200-33719600 Enhancers Right Atrium heart
47 chr6:33718200-33719800 Enhancers NHLF lung
48 chr6:33718200-33719800 Enhancers Osteobl bone
49 chr6:33718200-33720200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
50 chr6:33718200-33720600 Enhancers Fetal Intestine Large intestine

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