Variant report

Variant	nsv462897
Chromosome Location	chr6:33717770-33778964
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2660)
CpG islands
(count:2625)
Chromatin interactive
region (count:185)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2660 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:33739433-33739508	K562	blood:	n/a	n/a
2	ARID3A	chr6:33729824-33730418	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:33756893-33757185	K562	blood:	n/a	n/a
4	ARID3A	chr6:33736360-33736542	K562	blood:	n/a	n/a
5	ARID3A	chr6:33762864-33763019	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:33756851-33757291	HepG2	liver:	n/a	n/a
7	ATF1	chr6:33758459-33758502	K562	blood:	n/a	n/a
8	ATF2	chr6:33756768-33757258	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr6:33748853-33749811	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr6:33738083-33738453	GM12878	blood:	n/a	n/a
11	ATF2	chr6:33756744-33757210	GM12878	blood:	n/a	n/a
12	ATF2	chr6:33738005-33738630	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr6:33739248-33739775	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr6:33749015-33749509	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr6:33739098-33739759	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr6:33756765-33757237	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF2	chr6:33756884-33757231	GM12878	blood:	n/a	n/a
18	ATF3	chr6:33756603-33757107	K562	blood:	n/a	n/a
19	ATF3	chr6:33729986-33730262	K562	blood:	n/a	n/a
20	BACH1	chr6:33736378-33736647	H1-hESC	embryonic stem cell:	n/a	n/a
21	BACH1	chr6:33758815-33759365	H1-hESC	embryonic stem cell:	n/a	n/a
22	BACH1	chr6:33739335-33739508	K562	blood:	n/a	n/a
23	BACH1	chr6:33756597-33756629	H1-hESC	embryonic stem cell:	n/a	n/a
24	BACH1	chr6:33747215-33747362	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr6:33749213-33749572	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr6:33739337-33739630	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr6:33757058-33757455	K562	blood:	n/a	n/a
28	BATF	chr6:33756707-33757125	GM12878	blood:	n/a	n/a
29	BCL3	chr6:33738100-33738984	GM12878	blood:	n/a	n/a
30	BCL3	chr6:33732496-33732787	GM12878	blood:	n/a	n/a
31	BCL3	chr6:33732513-33732877	GM12878	blood:	n/a	n/a
32	BCLAF1	chr6:33756695-33757243	K562	blood:	n/a	chr6:33756961-33756970 chr6:33756958-33756967
33	BCLAF1	chr6:33756524-33757289	GM12878	blood:	n/a	chr6:33756961-33756970 chr6:33756958-33756967
34	BCLAF1	chr6:33756727-33757227	K562	blood:	n/a	chr6:33756961-33756970 chr6:33756958-33756967
35	BCLAF1	chr6:33755791-33756372	GM12878	blood:	n/a	chr6:33756028-33756037 chr6:33756062-33756071
36	BCLAF1	chr6:33756720-33757246	GM12878	blood:	n/a	chr6:33756961-33756970 chr6:33756958-33756967
37	BHLHE40	chr6:33756786-33757171	HepG2	liver:	n/a	n/a
38	BHLHE40	chr6:33756774-33757218	GM12878	blood:	n/a	n/a
39	BHLHE40	chr6:33738389-33738546	K562	blood:	n/a	n/a
40	BHLHE40	chr6:33756823-33757353	K562	blood:	n/a	n/a
41	BHLHE40	chr6:33755790-33756195	GM12878	blood:	n/a	n/a
42	BHLHE40	chr6:33729840-33730325	HepG2	liver:	n/a	n/a
43	BHLHE40	chr6:33729970-33730272	K562	blood:	n/a	n/a
44	BHLHE40	chr6:33755816-33756017	K562	blood:	n/a	n/a
45	BHLHE40	chr6:33739310-33739532	K562	blood:	n/a	n/a
46	BHLHE40	chr6:33736438-33736575	K562	blood:	n/a	chr6:33736513-33736529
47	BRCA1	chr6:33756878-33757180	H1-hESC	embryonic stem cell:	n/a	n/a
48	BRCA1	chr6:33739308-33739645	H1-hESC	embryonic stem cell:	n/a	n/a
49	BRCA1	chr6:33756723-33757052	HepG2	liver:	n/a	n/a
50	BRCA1	chr6:33739311-33739356	HepG2	liver:	n/a	n/a

(count:2625 , 50 per page) page: 1 2 3 4 5 6 7 ... 53

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:33754833-33754883	SK-N-SH	brain:	n/a
2	chr6:33772366-33772416	AG09319	gingival:	n/a
3	chr6:33754833-33754883	SK-N-SH	brain:	n/a
4	chr6:33772366-33772416	AG09319	gingival:	n/a
5	chr6:33756862-33756912	ProgFib	skin:	n/a
6	chr6:33770850-33770900	AG04450	lung:	fetal
7	chr6:33757040-33757090	HAEpiC	amniotic membrane:	n/a
8	chr6:33756082-33756132	H1-hESC	embryonic stem cell:	embryo
9	chr6:33767951-33768001	HL-60	blood:	n/a
10	chr6:33738291-33738341	T-47D	breast:	n/a
11	chr6:33756862-33756912	Hela-S3	cervix:	n/a
12	chr6:33760988-33761038	AG09309	skin:	n/a
13	chr6:33756905-33756955	HCM	heart:	n/a
14	chr6:33771799-33771849	CMK	blood:	n/a
15	chr6:33756902-33756952	NT2-D1	testis:	n/a
16	chr6:33730089-33730139	HRE	kidney:	n/a
17	chr6:33772366-33772416	K562	blood:	n/a
18	chr6:33771799-33771849	HRPEpiC	eye:	n/a
19	chr6:33771981-33772031	AG10803	skin:	n/a
20	chr6:33776528-33776578	GM12892	blood:	n/a
21	chr6:33736983-33737033	ECC-1	luminal epithelium:	n/a
22	chr6:33771981-33772031	HIPEpiC	eye:	n/a
23	chr6:33772366-33772416	CMK	blood:	n/a
24	chr6:33741802-33741852	GM12891	blood:	n/a
25	chr6:33749443-33749493	SAEC	small airway:	n/a
26	chr6:33740409-33740459	BE2_C	brain:	n/a
27	chr6:33772017-33772067	HRE	kidney:	n/a
28	chr6:33771799-33771849	GM06990	blood:	n/a
29	chr6:33752667-33752717	LNCaP	prostate:	n/a
30	chr6:33770212-33770262	HCT-116	colon:	n/a
31	chr6:33756905-33756955	HUVEC	blood vessel:	n/a
32	chr6:33757854-33757904	HUVEC	blood vessel:	n/a
33	chr6:33756082-33756132	NH-A	brain:	n/a
34	chr6:33757040-33757090	GM06990	blood:	n/a
35	chr6:33771799-33771849	HRCEpiC	kidney:	n/a
36	chr6:33730089-33730139	HRPEpiC	eye:	n/a
37	chr6:33756902-33756952	HAEpiC	amniotic membrane:	n/a
38	chr6:33730089-33730139	LNCaP	prostate:	n/a
39	chr6:33772017-33772067	LNCaP	prostate:	n/a
40	chr6:33739653-33739703	AG09319	gingival:	n/a
41	chr6:33757653-33757703	AG04450	lung:	fetal
42	chr6:33747192-33747242	LNCaP	prostate:	n/a
43	chr6:33757054-33757104	HRPEpiC	eye:	n/a
44	chr6:33772694-33772744	LNCaP	prostate:	n/a
45	chr6:33757062-33757112	HNPCEpiC	eye:	n/a
46	chr6:33772694-33772744	NHDF-neo	bronchial:	n/a
47	chr6:33757653-33757703	PrEC	prostate:	n/a
48	chr6:33760988-33761038	PANC-1	pancreas:	n/a
49	chr6:33757054-33757104	ECC-1	luminal epithelium:	n/a
50	chr6:33739558-33739608	MCF10A-Er-Src	breast:	n/a

(count:185 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr6:33683155..33686367-chr6:33732476..33736646,4	MCF-7	breast:
2	chr6:33733565..33735382-chr6:33741109..33742921,2	K562	blood:
3	chr6:33773235..33775828-chr6:33782693..33785367,2	K562	blood:
4	chr6:33725418..33728218-chr6:33736581..33739360,2	MCF-7	breast:
5	chr6:33736395..33737905-chr6:33740079..33742724,2	K562	blood:
6	chr6:33721254..33721988-chr6:33729704..33730219,2	K562	blood:
7	chr6:33733658..33736198-chr6:33737954..33739952,2	K562	blood:
8	chr6:33756053..33759472-chr6:33760488..33763867,4	MCF-7	breast:
9	chr6:33679171..33680096-chr6:33738966..33740153,3	K562	blood:
10	chr6:33728564..33732066-chr6:33733725..33737558,5	MCF-7	breast:
11	chr6:33756137..33757673-chr6:33765581..33767536,2	MCF-7	breast:
12	chr6:33727069..33729812-chr6:33754645..33756635,3	MCF-7	breast:
13	chr6:33678384..33680864-chr6:33733312..33735664,3	MCF-7	breast:
14	chr6:33553147..33553827-chr6:33730088..33730602,2	K562	blood:
15	chr6:33754851..33757425-chr6:33862551..33864997,3	MCF-7	breast:
16	chr6:33762823..33764594-chr6:33767158..33770034,2	K562	blood:
17	chr6:33734962..33738267-chr6:33754517..33756807,3	K562	blood:
18	chr6:33760837..33764079-chr6:33785814..33788727,4	MCF-7	breast:
19	chr6:33762823..33764594-chr6:33767158..33770034,2	K562	blood:
20	chr6:33717632..33719728-chr6:33734198..33737184,2	K562	blood:
21	chr6:33758412..33760501-chr6:33767524..33770306,2	MCF-7	breast:
22	chr6:33557463..33558024-chr6:33728236..33728791,2	K562	blood:
23	chr6:33738877..33740467-chr6:33741508..33744175,2	K562	blood:
24	chr6:33771896..33773520-chr6:33777733..33780554,2	MCF-7	breast:
25	chr6:33734585..33738916-chr6:33755602..33758855,4	MCF-7	breast:
26	chr6:33736449..33738043-chr6:34121024..34122876,2	MCF-7	breast:
27	chr6:33734392..33738843-chr6:33747253..33751824,5	MCF-7	breast:
28	chr6:33728239..33730038-chr6:33992593..33994238,2	MCF-7	breast:
29	chr6:33729702..33730489-chr6:33784415..33785270,3	MCF-7	breast:
30	chr6:33730661..33732317-chr6:33745927..33748398,2	MCF-7	breast:
31	chr6:33679206..33680031-chr6:33729674..33730625,9	MCF-7	breast:
32	chr6:33738202..33740373-chr6:34111521..34114051,2	K562	blood:
33	chr6:33758412..33760501-chr6:33767524..33770306,2	MCF-7	breast:
34	chr6:33715170..33717899-chr6:33734548..33736786,2	MCF-7	breast:
35	chr6:33729337..33731009-chr6:33738048..33739817,2	MCF-7	breast:
36	chr6:33721254..33721988-chr6:33729704..33730219,2	K562	blood:
37	chr6:33736023..33736621-chr6:33995139..33996006,3	K562	blood:
38	chr6:33738877..33740467-chr6:33741508..33744175,2	K562	blood:
39	chr6:33727358..33730164-chr6:33732846..33736236,4	K562	blood:
40	chr6:33756927..33758602-chr6:33764987..33767346,2	MCF-7	breast:
41	chr6:33760052..33762868-chr6:33807891..33810024,2	MCF-7	breast:
42	chr6:33678014..33680671-chr6:33755515..33757218,2	K562	blood:
43	chr6:33736224..33739190-chr6:33745201..33746852,2	MCF-7	breast:
44	chr6:33736395..33737905-chr6:33740079..33742724,2	K562	blood:
45	chr6:33712090..33712713-chr6:33729680..33730317,2	MCF-7	breast:
46	chr6:33717351..33720634-chr6:33722895..33725009,3	K562	blood:
47	chr6:33733421..33736486-chr6:33736727..33739454,3	K562	blood:
48	chr6:33677635..33679706-chr6:33732667..33735011,2	K562	blood:
49	chr6:33558047..33560338-chr6:33737884..33740577,2	K562	blood:
50	chr6:33678876..33680749-chr6:33729962..33732135,3	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MLN-2	chr6:33772059-33772268	expRegAs_chr6_3504_-

No data

Variant related genes	Relation type
MLN	TF binding region
IP6K3	TF binding region
LEMD2	TF binding region
MLN	CpG island
IP6K3	CpG island
LEMD2	CpG island
ENSG00000096433	chromatin interactions
ENSG00000137309	chromatin interactions
ENSG00000124493	chromatin interactions
ENSG00000204188	chromatin interactions
ENSG00000096395	chromatin interactions
ENSG00000161904	chromatin interactions
ENSG00000161896	chromatin interactions
ENSG00000249346	chromatin interactions
ENSG00000137288	chromatin interactions
ENSG00000172115	chromatin interactions
ENSG00000141232	chromatin interactions

Extended variants
information (count: 2525 )
Associated
traits (count: 107 )

Variant overlapped rSNPs/rCNVs (count:2525 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs9469583	chr6:33717770-33717771	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs72880506	chr6:33717838-33717839	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs561187888	chr6:33717844-33717845	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs186789109	chr6:33717859-33717860	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs543602575	chr6:33717873-33717874	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs114009154	chr6:33717877-33717878	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs532766987	chr6:33717881-33717882	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs114760114	chr6:33717941-33717942	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs147669214	chr6:33717943-33717944	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs7752152	chr6:33717951-33717952	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs148793909	chr6:33717972-33717973	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs562972668	chr6:33717973-33717974	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs191589576	chr6:33718029-33718030	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs537126032	chr6:33718031-33718032	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs558404125	chr6:33718045-33718046	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs538552748	chr6:33718048-33718049	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs199873129	chr6:33718066-33718067	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs10947435	chr6:33718075-33718076	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs534530180	chr6:33718077-33718078	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs552802002	chr6:33718165-33718166	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs574404290	chr6:33718177-33718178	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs4711344	chr6:33718227-33718228	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs534720730	chr6:33718245-33718246	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs7752348	chr6:33718252-33718253	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
25	rs187796799	chr6:33718260-33718261	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs77306957	chr6:33718264-33718265	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs565255367	chr6:33718274-33718275	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs577464557	chr6:33718302-33718303	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs541650862	chr6:33718320-33718321	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs560028403	chr6:33718341-33718342	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs530414747	chr6:33718363-33718364	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs375171014	chr6:33718367-33718368	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs4713675	chr6:33718418-33718419	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs116242619	chr6:33718419-33718420	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs530440429	chr6:33718469-33718470	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs115184759	chr6:33718499-33718500	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs570216480	chr6:33718508-33718509	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs560669265	chr6:33718534-33718535	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs551245060	chr6:33718545-33718546	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs575683443	chr6:33718568-33718569	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs370635688	chr6:33718570-33718571	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs56155944	chr6:33718582-33718583	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs564714406	chr6:33718701-33718702	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs567964131	chr6:33718733-33718734	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs554133036	chr6:33718746-33718747	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs533710521	chr6:33718774-33718775	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs557010854	chr6:33718788-33718789	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs192955650	chr6:33718834-33718835	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs185034473	chr6:33718835-33718836	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs114566989	chr6:33718838-33718839	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:107)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
abnormal development	18461090	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Autoimmune disease	19135723	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Urothelial carcinoma	21177765	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:2227 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:33712000-33717800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:33712400-33719600	Weak transcription	Gastric	stomach
3	chr6:33714200-33718400	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr6:33714200-33719200	Weak transcription	Pancreas	Pancrea
5	chr6:33714400-33718000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr6:33714800-33718000	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr6:33714800-33718200	Weak transcription	Right Atrium	heart
8	chr6:33714800-33718400	Weak transcription	Esophagus	oesophagus
9	chr6:33714800-33718400	Weak transcription	Placenta Amnion	Placenta Amnion
10	chr6:33714800-33718400	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr6:33714800-33718600	Weak transcription	Colonic Mucosa	Colon
12	chr6:33714800-33718800	Weak transcription	Rectal Mucosa Donor 29	rectum
13	chr6:33714800-33719200	Weak transcription	Lung	lung
14	chr6:33714800-33720600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr6:33714800-33721000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr6:33714800-33722600	Weak transcription	HUES64 Cell Line	embryonic stem cell
17	chr6:33715000-33718600	Weak transcription	Spleen	Spleen
18	chr6:33715000-33718600	Weak transcription	HMEC	breast
19	chr6:33715000-33720600	Enhancers	Fetal Muscle Leg	muscle
20	chr6:33715200-33718200	Weak transcription	NHLF	lung
21	chr6:33715200-33718400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
22	chr6:33715200-33737800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
23	chr6:33715400-33718600	Weak transcription	Right Ventricle	heart
24	chr6:33715600-33718000	Weak transcription	Liver	Liver
25	chr6:33715600-33718200	Weak transcription	Fetal Lung	lung
26	chr6:33715600-33718600	Weak transcription	Fetal Intestine Small	intestine
27	chr6:33715600-33719400	Weak transcription	Left Ventricle	heart
28	chr6:33715600-33719600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr6:33715600-33729400	Weak transcription	Duodenum Smooth Muscle	Duodenum
30	chr6:33715800-33718200	Weak transcription	Fetal Intestine Large	intestine
31	chr6:33716000-33718200	Enhancers	HSMM	muscle
32	chr6:33716200-33720400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr6:33716400-33717800	Enhancers	Fetal Muscle Trunk	muscle
34	chr6:33716400-33720600	Enhancers	Placenta	Placenta
35	chr6:33716600-33720600	Enhancers	Skeletal Muscle Female	skeletal muscle
36	chr6:33717000-33718200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr6:33717000-33718400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr6:33717000-33718400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
39	chr6:33717000-33723000	Weak transcription	H1 Cell Line	embryonic stem cell
40	chr6:33717200-33717800	Flanking Active TSS	Psoas Muscle	Psoas
41	chr6:33717200-33718400	Weak transcription	Fetal Thymus	thymus
42	chr6:33717600-33718600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
43	chr6:33717600-33718600	Enhancers	Muscle Satellite Cultured Cells	--
44	chr6:33717600-33719200	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
45	chr6:33717600-33720400	Enhancers	HSMMtube	muscle
46	chr6:33717800-33718200	Weak transcription	Fetal Muscle Trunk	muscle
47	chr6:33717800-33718200	Active TSS	Psoas Muscle	Psoas
48	chr6:33717800-33719600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr6:33718000-33718400	Weak transcription	HUES6 Cell Line	embryonic stem cell
50	chr6:33718000-33718400	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin

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