The 2.0 version of rSNPBase

Variant report

Variant rs56011846
Chromosome Location chr7:116690124-116690125
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:116675400-116691800 Weak transcription Ovary ovary
2 chr7:116677200-116691200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr7:116677600-116691400 Weak transcription Aorta Aorta
4 chr7:116682200-116690200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr7:116682200-116691400 Weak transcription Osteobl bone
6 chr7:116686400-116691400 Weak transcription Brain Hippocampus Middle brain
7 chr7:116686600-116690800 Weak transcription Left Ventricle heart
8 chr7:116686600-116691400 Weak transcription Pancreas Pancrea
9 chr7:116686600-116691400 Weak transcription Right Atrium heart
10 chr7:116686600-116701200 Weak transcription HSMMtube muscle
11 chr7:116686800-116691400 Weak transcription Brain Anterior Caudate brain
12 chr7:116686800-116712400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr7:116687400-116691200 Weak transcription Brain Angular Gyrus brain
14 chr7:116687800-116691400 Weak transcription Duodenum Mucosa Duodenum
15 chr7:116688000-116690200 Enhancers Rectal Mucosa Donor 31 rectum
16 chr7:116688000-116691400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr7:116688000-116691600 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr7:116688000-116691600 Weak transcription Rectal Smooth Muscle rectum
19 chr7:116688000-116694600 Weak transcription Brain Germinal Matrix brain
20 chr7:116688000-116697000 Weak transcription Fetal Lung lung
21 chr7:116688200-116691600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr7:116688200-116693200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr7:116688400-116692400 Enhancers Colon Smooth Muscle Colon
24 chr7:116688600-116690400 Enhancers Primary T cells fromperipheralblood blood
25 chr7:116688600-116692200 Enhancers Psoas Muscle Psoas
26 chr7:116688800-116691200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr7:116689000-116691600 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr7:116689200-116690600 Genic enhancers K562 blood
29 chr7:116689200-116691200 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr7:116689200-116691200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr7:116689200-116691400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr7:116689200-116691400 Weak transcription Spleen Spleen
33 chr7:116689400-116690200 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr7:116689400-116690200 Enhancers Primary T helper cells PMA-I stimulated --
35 chr7:116689400-116690400 Enhancers Primary T cells from cord blood blood
36 chr7:116689400-116691200 Weak transcription Brain Cingulate Gyrus brain
37 chr7:116689400-116693600 Weak transcription Right Ventricle heart
38 chr7:116689600-116691600 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr7:116689600-116692000 Weak transcription GM12878-XiMat blood
40 chr7:116689800-116693400 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr7:116690000-116690400 Weak transcription NHDF-Ad bronchial
42 chr7:116690000-116691000 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr7:116690000-116691200 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr7:116690000-116691800 Weak transcription Fetal Heart heart
45 chr7:116690000-116693600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015