Variant report

Variant	rs73210195
Chromosome Location	chr7:116717846-116717847
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	HDAC2	chr7:116717650-116718092	HepG2	liver:	n/a	n/a
2	NR2F2	chr7:116717632-116718286	HepG2	liver:	n/a	n/a
3	CEBPB	chr7:116717778-116717983	Hela-S3	cervix:	n/a	n/a
4	NFIC	chr7:116717594-116718252	HepG2	liver:	n/a	chr7:116717832-116717848 chr7:116717831-116717848
5	MAFK	chr7:116717702-116717943	HepG2	liver:	n/a	n/a
6	EP300	chr7:116717677-116718088	HepG2	liver:	n/a	n/a
7	FOXA2	chr7:116717483-116718320	HepG2	liver:	n/a	n/a
8	ZBTB7A	chr7:116717775-116718104	HepG2	liver:	n/a	n/a
9	CEBPB	chr7:116717693-116718072	HepG2	liver:	n/a	n/a
10	FOXA1	chr7:116717652-116718192	HepG2	liver:	n/a	n/a
11	EP300	chr7:116717723-116718116	HepG2	liver:	n/a	n/a
12	FOXA1	chr7:116717767-116718075	HepG2	liver:	n/a	n/a
13	ZBTB7A	chr7:116717811-116718021	HepG2	liver:	n/a	n/a
14	FOXA1	chr7:116717714-116718122	HepG2	liver:	n/a	n/a
15	TEAD4	chr7:116717508-116718201	HepG2	liver:	n/a	n/a
16	CEBPB	chr7:116717754-116717941	HepG2	liver:	n/a	n/a
17	MYBL2	chr7:116717604-116718139	HepG2	liver:	n/a	n/a
18	ARID3A	chr7:116717766-116718156	HepG2	liver:	n/a	n/a
19	FOXA1	chr7:116717651-116718194	HepG2	liver:	n/a	n/a
20	FOXA2	chr7:116717682-116718156	HepG2	liver:	n/a	n/a
21	NFIC	chr7:116717624-116718106	HepG2	liver:	n/a	chr7:116717832-116717848 chr7:116717831-116717848

Variant related genes	Relation type
ST7-AS2	TF binding region

rs_ID	r²[population]
rs56011846	1.00[ASN][1000 genomes]
rs62470806	1.00[ASN][1000 genomes]
rs6978286	1.00[ASN][1000 genomes]
rs73208183	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73210117	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73210122	1.00[ASN][1000 genomes]
rs73210188	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73210190	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73210192	1.00[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73211903	1.00[AFR][1000 genomes]
rs7802141	1.00[ASN][1000 genomes]

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:116711600-116718200	Enhancers	Fetal Heart	heart
2	chr7:116712000-116724200	Weak transcription	K562	blood
3	chr7:116713200-116723800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr7:116713200-116723800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr7:116713200-116723800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr7:116713200-116723800	Weak transcription	Brain Angular Gyrus	brain
7	chr7:116713200-116730800	Weak transcription	Aorta	Aorta
8	chr7:116713400-116721000	Weak transcription	HUVEC	blood vessel
9	chr7:116714600-116723400	Weak transcription	Gastric	stomach
10	chr7:116715600-116719200	Enhancers	Liver	Liver
11	chr7:116715800-116731800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr7:116716800-116723800	Weak transcription	Esophagus	oesophagus
13	chr7:116716800-116725400	Weak transcription	Brain Anterior Caudate	brain
14	chr7:116716800-116727800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
15	chr7:116717000-116718200	Weak transcription	Fetal Stomach	stomach
16	chr7:116717000-116724000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
17	chr7:116717000-116727000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr7:116717200-116718400	Enhancers	HepG2	liver
19	chr7:116717200-116725000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr7:116717200-116727800	Weak transcription	Right Atrium	heart
21	chr7:116717200-116744400	Weak transcription	Fetal Muscle Trunk	muscle
22	chr7:116717400-116718000	Weak transcription	Fetal Brain Male	brain
23	chr7:116717400-116719000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr7:116717400-116722800	Weak transcription	Brain Inferior Temporal Lobe	brain
25	chr7:116717400-116723400	Weak transcription	Left Ventricle	heart
26	chr7:116717400-116723800	Weak transcription	Right Ventricle	heart
27	chr7:116717400-116724000	Weak transcription	Skeletal Muscle Female	skeletal muscle
28	chr7:116717400-116736200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr7:116717600-116730400	Weak transcription	Skeletal Muscle Male	skeletal muscle
30	chr7:116717800-116721800	Weak transcription	Stomach Mucosa	stomach

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