Variant report

Variant rs560235
Chromosome Location chr11:100812058-100812059
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:100772000-100831400 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr11:100774800-100812800 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr11:100785400-100838400 Weak transcription Fetal Intestine Small intestine
4 chr11:100790200-100812600 Weak transcription Stomach Mucosa stomach
5 chr11:100794400-100812800 Weak transcription Fetal Stomach stomach
6 chr11:100798600-100812800 Weak transcription Brain Hippocampus Middle brain
7 chr11:100798600-100826600 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr11:100798600-100828200 Weak transcription Gastric stomach
9 chr11:100798800-100832200 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr11:100799200-100812800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr11:100799200-100812800 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr11:100800200-100846600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr11:100800800-100835800 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr11:100801000-100814800 Weak transcription HSMM muscle
15 chr11:100801000-100819600 Weak transcription HSMMtube muscle
16 chr11:100801000-100823200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr11:100801000-100832400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr11:100801000-100835000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr11:100801400-100812600 Weak transcription A549 lung
20 chr11:100801400-100833800 Weak transcription NH-A brain
21 chr11:100803000-100822600 Weak transcription Primary B cells from peripheral blood blood
22 chr11:100804000-100826200 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr11:100804200-100812800 Weak transcription Psoas Muscle Psoas
24 chr11:100805400-100812800 Weak transcription Stomach Smooth Muscle stomach
25 chr11:100806600-100837200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr11:100806800-100832400 Weak transcription Fetal Intestine Large intestine
27 chr11:100807800-100844600 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr11:100808000-100831200 Weak transcription Duodenum Mucosa Duodenum
29 chr11:100808000-100832200 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr11:100808000-100846600 Weak transcription Ovary ovary
31 chr11:100809200-100812600 Weak transcription Liver Liver
32 chr11:100809200-100812800 Weak transcription Adipose Nuclei Adipose
33 chr11:100809800-100813000 Weak transcription Placenta Placenta
34 chr11:100810000-100852200 Weak transcription Small Intestine intestine
35 chr11:100810400-100813200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr11:100810400-100845000 Weak transcription Primary B cells from cord blood blood
37 chr11:100810600-100848400 Weak transcription Rectal Smooth Muscle rectum
38 chr11:100811200-100812200 Weak transcription Fetal Muscle Leg muscle
39 chr11:100811600-100813200 Enhancers Fetal Lung lung
40 chr11:100811800-100812400 Enhancers Fetal Muscle Trunk muscle
41 chr11:100811800-100813000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr11:100811800-100813000 Enhancers Left Ventricle heart
43 chr11:100811800-100813000 Enhancers Right Atrium heart
44 chr11:100811800-100813800 Enhancers Fetal Adrenal Gland Adrenal Gland
45 chr11:100812000-100812600 Weak transcription Right Ventricle heart
46 chr11:100812000-100814200 Enhancers Fetal Heart heart
47 chr11:100812000-100825000 Weak transcription Pancreas Pancrea
48 chr11:100812000-100826600 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr11:100812000-100832000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr11:100812000-100841000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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