Variant report

Variant rs56033019
Chromosome Location chr5:178746897-178746898
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178741000-178747800 Enhancers Adipose Nuclei Adipose
2 chr5:178742000-178758000 Weak transcription Colon Smooth Muscle Colon
3 chr5:178742600-178747000 Weak transcription Placenta Amnion Placenta Amnion
4 chr5:178742800-178753000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr5:178743800-178747800 Enhancers Fetal Muscle Leg muscle
6 chr5:178744000-178747400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr5:178744200-178747800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr5:178744200-178748200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr5:178744400-178747600 Weak transcription Colonic Mucosa Colon
10 chr5:178744600-178747800 Enhancers NHDF-Ad bronchial
11 chr5:178744600-178748200 Enhancers Muscle Satellite Cultured Cells --
12 chr5:178744800-178747400 Bivalent Enhancer Placenta Placenta
13 chr5:178744800-178747800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
14 chr5:178745000-178747200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
15 chr5:178745000-178747800 Enhancers HSMM muscle
16 chr5:178745000-178748000 Enhancers HSMMtube muscle
17 chr5:178745000-178749800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr5:178745400-178747400 Bivalent Enhancer Fetal Stomach stomach
19 chr5:178745600-178748000 Enhancers NHLF lung
20 chr5:178746000-178747000 Weak transcription Brain Hippocampus Middle brain
21 chr5:178746000-178747200 Enhancers Fetal Muscle Trunk muscle
22 chr5:178746000-178747400 Enhancers Stomach Smooth Muscle stomach
23 chr5:178746200-178747000 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr5:178746400-178747200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
25 chr5:178746400-178747800 Enhancers Ovary ovary
26 chr5:178746400-178748200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
27 chr5:178746400-178749800 Weak transcription Brain Germinal Matrix brain
28 chr5:178746400-178758600 Weak transcription Gastric stomach
29 chr5:178746600-178747000 Enhancers Pancreas Pancrea
30 chr5:178746600-178747000 Enhancers Spleen Spleen
31 chr5:178746600-178747000 Enhancers NH-A brain
32 chr5:178746600-178747000 Enhancers Osteobl bone
33 chr5:178746600-178747400 Enhancers Fetal Lung lung
34 chr5:178746600-178747800 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
35 chr5:178746600-178748000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr5:178746600-178749000 Weak transcription Fetal Brain Male brain
37 chr5:178746600-178749800 Weak transcription Fetal Brain Female brain
38 chr5:178746600-178749800 Weak transcription Fetal Heart heart
39 chr5:178746600-178752000 Weak transcription Right Atrium heart
40 chr5:178746800-178747000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr5:178746800-178747000 Enhancers Fetal Thymus thymus
42 chr5:178746800-178747200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
43 chr5:178746800-178747200 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr5:178746800-178747400 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr5:178746800-178747400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr5:178746800-178747400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr5:178746800-178747400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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