The 2.0 version of rSNPBase

Variant report

Variant rs56055689
Chromosome Location chr8:59772909-59772910
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59746400-59773200 Weak transcription Fetal Intestine Small intestine
2 chr8:59758400-59777400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr8:59761000-59777200 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr8:59764200-59777600 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr8:59764200-59806400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr8:59767000-59773800 Enhancers HSMM muscle
7 chr8:59768000-59773600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr8:59768200-59773800 Enhancers NH-A brain
9 chr8:59768400-59773000 Enhancers Placenta Amnion Placenta Amnion
10 chr8:59770400-59774600 Strong transcription Primary T cells from cord blood blood
11 chr8:59770600-59773600 Enhancers Fetal Heart heart
12 chr8:59771200-59774600 Enhancers Osteobl bone
13 chr8:59771200-59777200 Weak transcription Aorta Aorta
14 chr8:59771200-59777200 Weak transcription Brain Hippocampus Middle brain
15 chr8:59771400-59773000 Enhancers Duodenum Mucosa Duodenum
16 chr8:59771400-59773000 Weak transcription Fetal Intestine Large intestine
17 chr8:59771400-59773000 Weak transcription Fetal Stomach stomach
18 chr8:59771400-59773000 Enhancers A549 lung
19 chr8:59771400-59773200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr8:59771400-59773200 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr8:59771400-59773400 Weak transcription Fetal Muscle Leg muscle
22 chr8:59771400-59773600 Weak transcription Fetal Kidney kidney
23 chr8:59771400-59774200 Enhancers Cortex derived primary cultured neurospheres brain
24 chr8:59771400-59774400 Enhancers NHDF-Ad bronchial
25 chr8:59771400-59775200 Enhancers Muscle Satellite Cultured Cells --
26 chr8:59771400-59775400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr8:59771400-59776400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr8:59771400-59776400 Weak transcription Colon Smooth Muscle Colon
29 chr8:59771400-59776800 Weak transcription Rectal Smooth Muscle rectum
30 chr8:59771400-59777000 Weak transcription Brain Anterior Caudate brain
31 chr8:59771400-59777200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr8:59771400-59777200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr8:59771400-59777200 Weak transcription Brain Angular Gyrus brain
34 chr8:59771400-59777200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr8:59771400-59777200 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr8:59771400-59777200 Weak transcription Fetal Lung lung
37 chr8:59771400-59777400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr8:59771400-59777600 Weak transcription Gastric stomach
39 chr8:59771400-59811000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr8:59771600-59773400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr8:59771600-59773400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr8:59771600-59773600 Weak transcription Primary hematopoietic stem cells blood
43 chr8:59771600-59773600 Enhancers Dnd41 blood
44 chr8:59771600-59776000 Weak transcription Brain Germinal Matrix brain
45 chr8:59771600-59777000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr8:59771600-59777000 Weak transcription Stomach Smooth Muscle stomach
47 chr8:59771600-59794000 Weak transcription Primary hematopoietic stem cells short term culture blood
48 chr8:59771800-59774200 Strong transcription Fetal Thymus thymus
49 chr8:59772000-59773200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
50 chr8:59772000-59773800 Enhancers K562 blood

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Last update: Aug 31, 2015