The 2.0 version of rSNPBase

Variant report

Variant rs62505121
Chromosome Location chr8:59763181-59763182
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59730800-59770800 Strong transcription Fetal Thymus thymus
2 chr8:59745600-59770800 Weak transcription Fetal Kidney kidney
3 chr8:59745800-59770800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr8:59746400-59773200 Weak transcription Fetal Intestine Small intestine
5 chr8:59746600-59763600 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr8:59746800-59763600 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr8:59747400-59770800 Weak transcription Pancreas Pancrea
8 chr8:59750800-59771000 Weak transcription H1 Cell Line embryonic stem cell
9 chr8:59751000-59763400 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr8:59755600-59770400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr8:59755800-59772200 Weak transcription Small Intestine intestine
12 chr8:59758400-59768600 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr8:59758400-59777400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr8:59759600-59770200 Weak transcription Rectal Smooth Muscle rectum
15 chr8:59760400-59764400 Strong transcription Cortex derived primary cultured neurospheres brain
16 chr8:59760400-59770800 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr8:59760600-59764200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr8:59760800-59764400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr8:59761000-59777200 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr8:59761200-59770800 Weak transcription Brain Inferior Temporal Lobe brain
21 chr8:59761600-59764200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr8:59761600-59764600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr8:59761600-59769000 Strong transcription Dnd41 blood
24 chr8:59761800-59764200 Strong transcription HUES48 Cell Line embryonic stem cell
25 chr8:59761800-59764400 Enhancers HUVEC blood vessel
26 chr8:59761800-59764600 Strong transcription Primary hematopoietic stem cells blood
27 chr8:59762000-59770800 Weak transcription Colon Smooth Muscle Colon
28 chr8:59762200-59763800 Flanking Active TSS A549 lung
29 chr8:59762200-59764400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr8:59762200-59766200 Enhancers Pancreatic Islets Pancreatic Islet
31 chr8:59762400-59763200 Enhancers Placenta Amnion Placenta Amnion
32 chr8:59762400-59763200 Enhancers NHDF-Ad bronchial
33 chr8:59762400-59763400 Enhancers ES-I3 Cell Line embryonic stem cell
34 chr8:59762400-59763400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr8:59762400-59763600 Flanking Active TSS Hela-S3 cervix
36 chr8:59762400-59763600 Enhancers HSMM muscle
37 chr8:59762400-59764000 Enhancers Osteobl bone
38 chr8:59762400-59764200 Strong transcription iPS-20b Cell Line embryonic stem cell
39 chr8:59762400-59764200 Strong transcription Primary T cells from cord blood blood
40 chr8:59762400-59764200 Enhancers Muscle Satellite Cultured Cells --
41 chr8:59762400-59764200 Strong transcription Stomach Smooth Muscle stomach
42 chr8:59762400-59764200 Enhancers HSMMtube muscle
43 chr8:59762400-59764400 Enhancers NH-A brain
44 chr8:59762400-59765000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr8:59762600-59763200 Enhancers ES-WA7 Cell Line embryonic stem cell
46 chr8:59762600-59763200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr8:59762600-59763200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr8:59762600-59763200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
49 chr8:59762600-59763200 Enhancers Placenta Placenta
50 chr8:59762600-59763400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015