The 2.0 version of rSNPBase

Variant report

Variant rs56056525
Chromosome Location chr14:78355078-78355079
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:78306000-78356400 Weak transcription Thymus Thymus
2 chr14:78327800-78400600 Weak transcription Colonic Mucosa Colon
3 chr14:78335800-78358600 Weak transcription HSMMtube muscle
4 chr14:78346600-78375600 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr14:78347200-78366000 Weak transcription Psoas Muscle Psoas
6 chr14:78348000-78356400 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr14:78349200-78355200 Weak transcription Rectal Smooth Muscle rectum
8 chr14:78349200-78355800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr14:78349200-78356000 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr14:78349200-78356000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr14:78349200-78358200 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr14:78349200-78397200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr14:78349200-78407200 Weak transcription Colon Smooth Muscle Colon
14 chr14:78349400-78355400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr14:78349400-78378000 Weak transcription Fetal Brain Female brain
16 chr14:78349800-78358400 Weak transcription Stomach Mucosa stomach
17 chr14:78350000-78355800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr14:78350200-78355600 Weak transcription Primary B cells from peripheral blood blood
19 chr14:78350200-78355800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr14:78350400-78361200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr14:78350600-78365400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr14:78350800-78375800 Weak transcription Brain Cingulate Gyrus brain
23 chr14:78350800-78376200 Weak transcription Brain Angular Gyrus brain
24 chr14:78351200-78356800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr14:78352200-78356400 Weak transcription HMEC breast
26 chr14:78352600-78398800 Weak transcription Primary T cells fromperipheralblood blood
27 chr14:78352800-78356600 Strong transcription Primary T cells from cord blood blood
28 chr14:78353000-78356800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr14:78353200-78356400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr14:78353400-78356000 Strong transcription Duodenum Mucosa Duodenum
31 chr14:78353400-78356800 Strong transcription Stomach Smooth Muscle stomach
32 chr14:78353400-78358200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr14:78353600-78355200 Strong transcription Duodenum Smooth Muscle Duodenum
34 chr14:78353600-78355400 Strong transcription Dnd41 blood
35 chr14:78353600-78355800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr14:78353600-78356000 Strong transcription Sigmoid Colon Sigmoid Colon
37 chr14:78353600-78356200 Strong transcription Primary T helper cells fromperipheralblood blood
38 chr14:78353600-78356200 Strong transcription Liver Liver
39 chr14:78353600-78356200 Strong transcription Left Ventricle heart
40 chr14:78354000-78355200 Strong transcription Brain Hippocampus Middle brain
41 chr14:78354000-78375800 Weak transcription Brain Inferior Temporal Lobe brain
42 chr14:78354000-78375800 Weak transcription Gastric stomach
43 chr14:78354200-78355800 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr14:78354200-78356000 Strong transcription Fetal Intestine Large intestine
45 chr14:78354200-78356600 Strong transcription Primary B cells from cord blood blood
46 chr14:78354400-78355200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
47 chr14:78354400-78356200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
48 chr14:78354400-78374400 Weak transcription Fetal Muscle Leg muscle
49 chr14:78354600-78355800 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr14:78354600-78356000 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015