Variant report

Variant rs56060937
Chromosome Location chr1:146555403-146555404
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:146552200-146555600 Weak transcription Right Atrium heart
2 chr1:146552600-146555600 Weak transcription Pancreas Pancrea
3 chr1:146555000-146555600 Bivalent/Poised TSS Brain Hippocampus Middle brain
4 chr1:146555000-146555800 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
5 chr1:146555000-146557200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
6 chr1:146555000-146557200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
7 chr1:146555200-146555600 Bivalent Enhancer H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr1:146555200-146555600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
9 chr1:146555200-146555600 Enhancers Primary B cells from peripheral blood blood
10 chr1:146555200-146555600 Bivalent Enhancer Primary T cells fromperipheralblood blood
11 chr1:146555200-146555600 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
12 chr1:146555200-146555600 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
13 chr1:146555200-146555600 Flanking Bivalent TSS/Enh Primary T killer memory cells from peripheral blood blood
14 chr1:146555200-146555600 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr1:146555200-146555600 Bivalent Enhancer Brain Substantia Nigra brain
16 chr1:146555200-146555600 Bivalent Enhancer Fetal Intestine Large intestine
17 chr1:146555200-146555600 Flanking Active TSS Hela-S3 cervix
18 chr1:146555200-146555600 Bivalent/Poised TSS Osteobl bone
19 chr1:146555200-146555800 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
20 chr1:146555200-146555800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:146555200-146555800 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
22 chr1:146555200-146555800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:146555200-146556000 Bivalent/Poised TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:146555200-146556000 Flanking Active TSS K562 blood
25 chr1:146555200-146556800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr1:146555200-146557200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
27 chr1:146555200-146557200 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
28 chr1:146555200-146557400 Active TSS HSMMtube muscle
29 chr1:146555400-146555600 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:146555400-146555600 Flanking Bivalent TSS/Enh hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr1:146555400-146555600 Flanking Bivalent TSS/Enh hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr1:146555400-146555600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr1:146555400-146555600 Flanking Bivalent TSS/Enh Breast Myoepithelial Primary Cells Breast
34 chr1:146555400-146555600 Flanking Bivalent TSS/Enh Primary T cells from cord blood blood
35 chr1:146555400-146555600 Enhancers Primary hematopoietic stem cells blood
36 chr1:146555400-146555600 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr1:146555400-146555600 Enhancers Primary T helper naive cells from peripheral blood blood
38 chr1:146555400-146555600 Flanking Bivalent TSS/Enh Primary T helper cells PMA-I stimulated --
39 chr1:146555400-146555600 Flanking Bivalent TSS/Enh Primary T helper cells fromperipheralblood blood
40 chr1:146555400-146555600 Bivalent Enhancer Primary T regulatory cells fromperipheralblood blood
41 chr1:146555400-146555600 Bivalent/Poised TSS Primary T cells effector/memory enriched fromperipheralblood blood
42 chr1:146555400-146555600 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
43 chr1:146555400-146555600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:146555400-146555600 Bivalent/Poised TSS Primary mononuclear cells fromperipheralblood Blood
45 chr1:146555400-146555600 Flanking Bivalent TSS/Enh Liver Liver
46 chr1:146555400-146555600 Bivalent Enhancer Brain Angular Gyrus brain
47 chr1:146555400-146555600 Bivalent/Poised TSS Brain Germinal Matrix brain
48 chr1:146555400-146555600 Bivalent/Poised TSS Colonic Mucosa Colon
49 chr1:146555400-146555600 Bivalent/Poised TSS Colon Smooth Muscle Colon
50 chr1:146555400-146555600 Bivalent Enhancer Esophagus oesophagus

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