The 2.0 version of rSNPBase

Variant report

Variant rs56077689
Chromosome Location chr10:61845459-61845460
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:61791800-61849000 Weak transcription Pancreas Pancrea
2 chr10:61792200-61883200 Weak transcription Psoas Muscle Psoas
3 chr10:61805600-61859800 Weak transcription Brain Substantia Nigra brain
4 chr10:61806000-61847800 Weak transcription Fetal Lung lung
5 chr10:61814400-61848800 Weak transcription Gastric stomach
6 chr10:61817400-61857000 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr10:61818200-61848000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr10:61819600-61860200 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr10:61820800-61845600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr10:61824200-61856800 Weak transcription NH-A brain
11 chr10:61825000-61849000 Weak transcription Rectal Smooth Muscle rectum
12 chr10:61828400-61859800 Weak transcription Fetal Brain Male brain
13 chr10:61829200-61847800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr10:61830000-61851600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr10:61831000-61849200 Strong transcription Primary T helper cells fromperipheralblood blood
16 chr10:61832800-61848600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr10:61834000-61868000 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr10:61835000-61859600 Weak transcription Brain Angular Gyrus brain
19 chr10:61835400-61845600 Weak transcription K562 blood
20 chr10:61835400-61870000 Weak transcription Fetal Muscle Leg muscle
21 chr10:61835400-61883200 Weak transcription Brain Cingulate Gyrus brain
22 chr10:61835600-61848600 Weak transcription Muscle Satellite Cultured Cells --
23 chr10:61835600-61874600 Weak transcription Brain Anterior Caudate brain
24 chr10:61835600-61883000 Weak transcription Fetal Heart heart
25 chr10:61835800-61866400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr10:61836000-61845800 Weak transcription Fetal Kidney kidney
27 chr10:61836000-61865200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr10:61836000-61874800 Weak transcription HSMMtube muscle
29 chr10:61836000-61881800 Weak transcription Left Ventricle heart
30 chr10:61836000-61893200 Weak transcription Placenta Amnion Placenta Amnion
31 chr10:61836200-61845800 Weak transcription H1 Cell Line embryonic stem cell
32 chr10:61836200-61846000 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr10:61836200-61847600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr10:61836200-61847800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr10:61836200-61847800 Weak transcription Fetal Intestine Small intestine
36 chr10:61836200-61850000 Weak transcription Brain Hippocampus Middle brain
37 chr10:61836200-61850800 Weak transcription Esophagus oesophagus
38 chr10:61836200-61851000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr10:61836200-61853400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr10:61836200-61864400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr10:61836200-61870000 Weak transcription Fetal Brain Female brain
42 chr10:61836200-61870200 Weak transcription Fetal Stomach stomach
43 chr10:61836800-61845800 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr10:61837200-61849400 Strong transcription Placenta Placenta
45 chr10:61837600-61847200 Strong transcription Skeletal Muscle Female skeletal muscle
46 chr10:61838200-61848000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr10:61838800-61848800 Weak transcription Small Intestine intestine
48 chr10:61838800-61864000 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr10:61839800-61859000 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr10:61839800-61876400 Weak transcription Fetal Muscle Trunk muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015