Variant report

Variant	rs56078331
Chromosome Location	chr6:44647753-44647754
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:44646457..44648183-chr6:44695917..44698549,2	MCF-7	breast:
2	chr6:44647342..44649006-chr6:44651630..44653400,2	K562	blood:
3	chr6:44647390..44649245-chr6:44650574..44652744,2	MCF-7	breast:

rs_ID	r²[population]
rs17335164	1.00[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs489757	1.00[AFR][1000 genomes]
rs527045	1.00[AFR][1000 genomes]
rs56099336	1.00[AFR][1000 genomes]
rs582006	1.00[AFR][1000 genomes]

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44636400-44649200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr6:44644400-44652800	Weak transcription	HMEC	breast
3	chr6:44644600-44649200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr6:44644800-44649000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr6:44645400-44647800	Weak transcription	HSMM	muscle
6	chr6:44646400-44647800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr6:44646600-44647800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr6:44647200-44648600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr6:44647400-44648000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr6:44647400-44648200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr6:44647400-44648400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr6:44647400-44648400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr6:44647400-44648600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr6:44647400-44648600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr6:44647400-44648600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr6:44647400-44648800	Enhancers	NHEK	skin
17	chr6:44647400-44650000	Enhancers	Muscle Satellite Cultured Cells	--
18	chr6:44647400-44650800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr6:44647600-44648200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr6:44647600-44648400	Weak transcription	HSMMtube	muscle
21	chr6:44647600-44651000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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