Variant report
| Variant | rs17335164 |
|---|---|
| Chromosome Location | chr6:44662629-44662630 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:52)
| rs_ID | r2[population] |
|---|---|
| rs1283921 | 1.00[ASN][1000 genomes] |
| rs1283922 | 1.00[ASN][1000 genomes] |
| rs1283924 | 1.00[ASN][1000 genomes] |
| rs1293597 | 1.00[ASN][1000 genomes] |
| rs1296351 | 1.00[ASN][1000 genomes] |
| rs1298942 | 1.00[ASN][1000 genomes] |
| rs16869119 | 1.00[YRI][hapmap] |
| rs190137 | 1.00[ASN][1000 genomes] |
| rs227804 | 1.00[ASN][1000 genomes] |
| rs227805 | 1.00[ASN][1000 genomes] |
| rs227807 | 1.00[ASN][1000 genomes] |
| rs227809 | 1.00[ASN][1000 genomes] |
| rs227810 | 1.00[ASN][1000 genomes] |
| rs227811 | 1.00[ASN][1000 genomes] |
| rs227815 | 1.00[ASN][1000 genomes] |
| rs227816 | 1.00[ASN][1000 genomes] |
| rs227820 | 1.00[ASN][1000 genomes] |
| rs227821 | 1.00[ASN][1000 genomes] |
| rs227822 | 1.00[ASN][1000 genomes] |
| rs227823 | 1.00[ASN][1000 genomes] |
| rs227825 | 1.00[ASN][1000 genomes] |
| rs227856 | 1.00[ASN][1000 genomes] |
| rs2461016 | 1.00[ASN][1000 genomes] |
| rs3799965 | 1.00[YRI][hapmap] |
| rs3799972 | 1.00[YRI][hapmap] |
| rs3799974 | 1.00[YRI][hapmap] |
| rs4714812 | 1.00[YRI][hapmap] |
| rs489757 | 1.00[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs491590 | 1.00[ASN][1000 genomes] |
| rs504907 | 1.00[ASN][1000 genomes] |
| rs527045 | 1.00[AFR][1000 genomes] |
| rs545441 | 1.00[ASN][1000 genomes] |
| rs551817 | 1.00[ASN][1000 genomes] |
| rs552919 | 1.00[ASN][1000 genomes] |
| rs552972 | 1.00[ASN][1000 genomes] |
| rs554682 | 1.00[ASN][1000 genomes] |
| rs56078331 | 1.00[AFR][1000 genomes];0.93[EUR][1000 genomes] |
| rs56099336 | 1.00[AFR][1000 genomes] |
| rs567297 | 1.00[ASN][1000 genomes] |
| rs570778 | 1.00[ASN][1000 genomes] |
| rs582006 | 1.00[AFR][1000 genomes] |
| rs613208 | 1.00[ASN][1000 genomes] |
| rs613948 | 1.00[ASN][1000 genomes] |
| rs625595 | 1.00[ASN][1000 genomes] |
| rs626965 | 1.00[ASN][1000 genomes] |
| rs631320 | 1.00[ASN][1000 genomes] |
| rs641011 | 1.00[ASN][1000 genomes] |
| rs641340 | 1.00[ASN][1000 genomes] |
| rs666652 | 1.00[ASN][1000 genomes] |
| rs672098 | 1.00[ASN][1000 genomes] |
| rs7769218 | 1.00[YRI][hapmap] |
| rs9472331 | 1.00[YRI][hapmap] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:44657000-44667200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 2 | chr6:44660000-44666400 | Weak transcription | Right Atrium | heart |
| 3 | chr6:44661800-44665200 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 4 | chr6:44662600-44669600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
