Variant report

Variant rs560793934
Chromosome Location chr15:78112184-78112185
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:78110600-78112800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
2 chr15:78110600-78112800 Bivalent/Poised TSS Brain Cingulate Gyrus brain
3 chr15:78110600-78113000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
4 chr15:78110600-78113000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
5 chr15:78110600-78113200 Active TSS Brain Angular Gyrus brain
6 chr15:78110800-78112800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
7 chr15:78110800-78112800 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
8 chr15:78110800-78113000 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
9 chr15:78111000-78112600 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
10 chr15:78111000-78112600 Active TSS Fetal Brain Female brain
11 chr15:78111000-78112800 Active TSS H9 Cell Line embryonic stem cell
12 chr15:78111000-78112800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
13 chr15:78111000-78112800 Bivalent/Poised TSS Brain Hippocampus Middle brain
14 chr15:78111000-78112800 Bivalent/Poised TSS Ovary ovary
15 chr15:78111000-78113000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
16 chr15:78111000-78113600 Active TSS Brain Inferior Temporal Lobe brain
17 chr15:78111200-78112200 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
18 chr15:78111200-78112600 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr15:78111200-78112600 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
20 chr15:78111200-78112600 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
21 chr15:78111200-78112600 Bivalent/Poised TSS Fetal Intestine Small intestine
22 chr15:78111200-78112600 Bivalent/Poised TSS Thymus Thymus
23 chr15:78111200-78112800 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
24 chr15:78111200-78112800 Bivalent/Poised TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr15:78111200-78112800 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr15:78111200-78112800 Enhancers Primary B cells from cord blood blood
27 chr15:78111200-78112800 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
28 chr15:78111200-78112800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
29 chr15:78111200-78112800 Bivalent/Poised TSS A549 lung
30 chr15:78111200-78113000 Active TSS Brain Anterior Caudate brain
31 chr15:78111400-78112600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
32 chr15:78111400-78112600 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin01 Skin
33 chr15:78111400-78112600 Bivalent/Poised TSS Aorta Aorta
34 chr15:78111400-78112600 Bivalent/Poised TSS Brain Germinal Matrix brain
35 chr15:78111400-78112600 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
36 chr15:78111400-78112600 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
37 chr15:78111600-78112400 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr15:78111600-78112400 Flanking Bivalent TSS/Enh Right Ventricle heart
39 chr15:78111600-78112400 Active TSS HSMM muscle
40 chr15:78111600-78112600 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr15:78111600-78112600 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr15:78111600-78112600 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr15:78111600-78112600 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr15:78111600-78112600 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
45 chr15:78111600-78112600 Bivalent/Poised TSS Fetal Muscle Leg muscle
46 chr15:78111600-78112600 Active TSS Placenta Amnion Placenta Amnion
47 chr15:78111600-78112600 Active TSS Skeletal Muscle Female skeletal muscle
48 chr15:78111600-78112600 Bivalent Enhancer Stomach Mucosa stomach
49 chr15:78111600-78112800 Flanking Active TSS Primary hematopoietic stem cells blood
50 chr15:78111600-78112800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood

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