| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1040452 |
chr12:85179586-85747907 |
Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
esv1792335 |
chr12:85321249-86003609 |
Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
18 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv899388 |
chr12:85427691-85766847 |
Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv817242 |
chr12:85622245-86069213 |
Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1054573 |
chr12:85658602-86235433 |
Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv1035600 |
chr12:85661373-86235433 |
Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv899393 |
chr12:85674707-85796968 |
Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv455678 |
chr12:85698817-85785109 |
Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv559663 |
chr12:85698817-85785109 |
Weak transcription Bivalent Enhancer Enhancers Active TSS Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv899394 |
chr12:85702371-85796968 |
Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv1052513 |
chr12:85721058-85799332 |
Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
