Variant report

Variant	rs56122616
Chromosome Location	chr3:155260007-155260008
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs1356604	1.00[EUR][1000 genomes]
rs17414151	1.00[EUR][1000 genomes]
rs58511995	1.00[EUR][1000 genomes]
rs6768491	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73005140	1.00[EUR][1000 genomes]
rs73013284	1.00[EUR][1000 genomes]
rs73873138	1.00[EUR][1000 genomes]
rs7650465	1.00[EUR][1000 genomes]

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:155230600-155271400	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr3:155232200-155274000	Weak transcription	Pancreas	Pancrea
3	chr3:155241800-155273000	Weak transcription	Duodenum Mucosa	Duodenum
4	chr3:155253600-155273600	Weak transcription	Gastric	stomach
5	chr3:155253800-155266200	Weak transcription	Fetal Kidney	kidney
6	chr3:155257000-155289600	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr3:155257400-155266000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr3:155258800-155260200	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
9	chr3:155259400-155266000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr3:155259400-155266000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
11	chr3:155259400-155284800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr3:155259400-155289800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr3:155259600-155271400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
14	chr3:155259800-155260200	ZNF genes & repeats	Fetal Thymus	thymus
15	chr3:155259800-155265800	Weak transcription	HUES64 Cell Line	embryonic stem cell
16	chr3:155259800-155265800	Weak transcription	Dnd41	blood
17	chr3:155259800-155266000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr3:155259800-155266000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
19	chr3:155259800-155266600	Weak transcription	Thymus	Thymus
20	chr3:155259800-155278000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
21	chr3:155260000-155265800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr3:155260000-155271600	Weak transcription	Fetal Intestine Small	intestine
23	chr3:155260000-155278200	Weak transcription	HUES6 Cell Line	embryonic stem cell

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