Variant report
| Variant | rs56148439 |
|---|---|
| Chromosome Location | chr6:24430381-24430382 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:24404600-24437400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr6:24410000-24430800 | Strong transcription | Left Ventricle | heart |
| 3 | chr6:24412600-24430800 | Strong transcription | Primary T cells from cord blood | blood |
| 4 | chr6:24417400-24451800 | Strong transcription | Liver | Liver |
| 5 | chr6:24421200-24448800 | Weak transcription | Gastric | stomach |
| 6 | chr6:24421200-24459600 | Weak transcription | Spleen | Spleen |
| 7 | chr6:24421400-24434000 | Weak transcription | Fetal Brain Male | brain |
| 8 | chr6:24421600-24432000 | Weak transcription | Fetal Heart | heart |
| 9 | chr6:24422400-24431400 | Weak transcription | Fetal Intestine Small | intestine |
| 10 | chr6:24422400-24437400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 11 | chr6:24423400-24433600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 12 | chr6:24423400-24437200 | Weak transcription | Pancreas | Pancrea |
| 13 | chr6:24423400-24439400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 14 | chr6:24423600-24437200 | Weak transcription | Right Ventricle | heart |
| 15 | chr6:24423800-24432000 | Weak transcription | NHEK | skin |
| 16 | chr6:24424000-24432200 | Weak transcription | Small Intestine | intestine |
| 17 | chr6:24424000-24456600 | Weak transcription | Ovary | ovary |
| 18 | chr6:24424400-24445800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 19 | chr6:24425400-24432000 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 20 | chr6:24425400-24437200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 21 | chr6:24425400-24439600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 22 | chr6:24426000-24431000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 23 | chr6:24426000-24438800 | Weak transcription | Brain Substantia Nigra | brain |
| 24 | chr6:24426200-24430600 | Weak transcription | Esophagus | oesophagus |
| 25 | chr6:24426200-24431600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 26 | chr6:24426200-24446000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 27 | chr6:24426400-24431400 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 28 | chr6:24426400-24432400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 29 | chr6:24426400-24441600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 30 | chr6:24426400-24446000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 31 | chr6:24426600-24438800 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 32 | chr6:24427000-24431600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 33 | chr6:24427200-24433800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 34 | chr6:24427400-24435000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 35 | chr6:24427600-24432400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 36 | chr6:24427600-24433800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 37 | chr6:24427600-24436600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 38 | chr6:24427600-24437600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 39 | chr6:24427600-24439200 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 40 | chr6:24427600-24439400 | Weak transcription | Fetal Thymus | thymus |
| 41 | chr6:24427600-24440000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 42 | chr6:24427600-24440000 | Weak transcription | Dnd41 | blood |
| 43 | chr6:24427600-24441800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 44 | chr6:24427600-24445600 | Weak transcription | Fetal Brain Female | brain |
| 45 | chr6:24427600-24456800 | Weak transcription | Lung | lung |
| 46 | chr6:24427800-24431800 | Weak transcription | Fetal Intestine Large | intestine |
| 47 | chr6:24427800-24435800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 48 | chr6:24427800-24467000 | Weak transcription | Brain Germinal Matrix | brain |
| 49 | chr6:24428200-24431200 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 50 | chr6:24428200-24432600 | Weak transcription | GM12878-XiMat | blood |
