Variant report

Variant rs561583544
Chromosome Location chr22:20378501-20378502
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20378000-20378600 Active TSS Breast Myoepithelial Primary Cells Breast
2 chr22:20378000-20378600 Active TSS Primary hematopoietic stem cells short term culture blood
3 chr22:20378000-20379000 Active TSS iPS-18 Cell Line embryonic stem cell
4 chr22:20378000-20379000 Active TSS Primary monocytes fromperipheralblood blood
5 chr22:20378000-20379000 Active TSS Primary B cells from peripheral blood blood
6 chr22:20378000-20379000 Active TSS Primary T cells fromperipheralblood blood
7 chr22:20378000-20379000 Active TSS Primary Natural Killer cells fromperipheralblood blood
8 chr22:20378000-20379000 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr22:20378000-20379000 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr22:20378000-20379000 Active TSS Fetal Adrenal Gland Adrenal Gland
11 chr22:20378000-20379000 Active TSS Fetal Stomach stomach
12 chr22:20378000-20379000 Active TSS Fetal Thymus thymus
13 chr22:20378000-20379000 Active TSS Dnd41 blood
14 chr22:20378000-20379000 Active TSS HepG2 liver
15 chr22:20378000-20379000 Active TSS HMEC breast
16 chr22:20378000-20379200 Active TSS Brain Germinal Matrix brain
17 chr22:20378000-20379800 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
18 chr22:20378000-20380000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr22:20378200-20378600 Active TSS Primary mononuclear cells fromperipheralblood Blood
20 chr22:20378200-20378800 Active TSS Fetal Muscle Leg muscle
21 chr22:20378200-20379000 Active TSS Primary T helper cells fromperipheralblood blood
22 chr22:20378200-20379000 Active TSS Fetal Intestine Large intestine
23 chr22:20378200-20379000 Active TSS HSMM muscle
24 chr22:20378400-20378800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr22:20378400-20378800 Active TSS Primary T helper 17 cells PMA-I stimulated --
26 chr22:20378400-20378800 Active TSS Ovary ovary
27 chr22:20378400-20378800 Active TSS HSMMtube muscle
28 chr22:20378400-20379000 Active TSS H9 Cell Line embryonic stem cell
29 chr22:20378400-20379000 Active TSS HUES48 Cell Line embryonic stem cell
30 chr22:20378400-20379000 Active TSS HUES6 Cell Line embryonic stem cell
31 chr22:20378400-20379000 Active TSS HUES64 Cell Line embryonic stem cell
32 chr22:20378400-20379000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
33 chr22:20378400-20379000 Active TSS iPS-20b Cell Line embryonic stem cell
34 chr22:20378400-20379000 Active TSS Primary T helper memory cells from peripheral blood 2 blood
35 chr22:20378400-20379000 Active TSS Primary T helper naive cells fromperipheralblood blood
36 chr22:20378400-20379000 Active TSS Primary T helper cells PMA-I stimulated --
37 chr22:20378400-20379000 Active TSS Primary T killer naive cells fromperipheralblood blood
38 chr22:20378400-20379000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr22:20378400-20379000 Active TSS Adipose Nuclei Adipose
40 chr22:20378400-20379000 Active TSS Brain Cingulate Gyrus brain
41 chr22:20378400-20379000 Active TSS Brain Hippocampus Middle brain
42 chr22:20378400-20379000 Active TSS Colon Smooth Muscle Colon
43 chr22:20378400-20379000 Active TSS Duodenum Smooth Muscle Duodenum
44 chr22:20378400-20379000 Active TSS Right Atrium heart
45 chr22:20378400-20379000 Active TSS Stomach Smooth Muscle stomach
46 chr22:20378400-20379000 Active TSS K562 blood
47 chr22:20378400-20379000 Active TSS Osteobl bone
48 chr22:20378400-20379800 Active TSS Primary T regulatory cells fromperipheralblood blood
49 chr22:20378400-20379800 Active TSS Monocytes-CD14+_RO01746 blood
50 chr22:20378400-20393400 Weak transcription Fetal Intestine Small intestine

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