Variant report

Variant rs561614246
Chromosome Location chr22:21810426-21810427
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:21801200-21810800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr22:21801600-21811800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr22:21802200-21810800 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr22:21802200-21812000 Weak transcription Duodenum Mucosa Duodenum
5 chr22:21802400-21810600 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr22:21802400-21811800 Weak transcription Rectal Smooth Muscle rectum
7 chr22:21802400-21822400 Weak transcription Lung lung
8 chr22:21802600-21810600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr22:21802600-21810800 Weak transcription Esophagus oesophagus
10 chr22:21802600-21811000 Weak transcription Primary T cells from cord blood blood
11 chr22:21802800-21811200 Weak transcription NHLF lung
12 chr22:21803000-21810600 Weak transcription HepG2 liver
13 chr22:21803400-21810600 Weak transcription Pancreas Pancrea
14 chr22:21803400-21811400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr22:21803600-21811200 Weak transcription Placenta Placenta
16 chr22:21803600-21836000 Weak transcription Fetal Intestine Large intestine
17 chr22:21803800-21811200 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr22:21804000-21810600 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr22:21804200-21810800 Weak transcription Right Ventricle heart
20 chr22:21804200-21835200 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr22:21804800-21812800 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr22:21805000-21810800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr22:21805000-21810800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr22:21805000-21811000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr22:21805000-21811400 Weak transcription K562 blood
26 chr22:21805000-21811600 Weak transcription Spleen Spleen
27 chr22:21805000-21813000 Weak transcription Thymus Thymus
28 chr22:21805000-21822400 Weak transcription Brain Germinal Matrix brain
29 chr22:21805200-21812600 Weak transcription Fetal Brain Female brain
30 chr22:21806000-21811000 Weak transcription Fetal Lung lung
31 chr22:21806200-21811200 Weak transcription Fetal Muscle Trunk muscle
32 chr22:21806400-21822400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr22:21806400-21836000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr22:21809000-21811000 Strong transcription Fetal Stomach stomach
35 chr22:21809400-21811000 Strong transcription Fetal Intestine Small intestine
36 chr22:21809400-21812000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr22:21809600-21810800 Enhancers A549 lung
38 chr22:21809600-21811000 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr22:21809600-21811200 Enhancers H1 Cell Line embryonic stem cell
40 chr22:21809600-21811200 Strong transcription Right Atrium heart
41 chr22:21809600-21811600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
42 chr22:21809600-21811800 Enhancers ES-I3 Cell Line embryonic stem cell
43 chr22:21809600-21811800 Enhancers HUES6 Cell Line embryonic stem cell
44 chr22:21809600-21812400 Enhancers Liver Liver
45 chr22:21810000-21811200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr22:21810000-21811400 Weak transcription H9 Cell Line embryonic stem cell
47 chr22:21810000-21811800 Enhancers ES-WA7 Cell Line embryonic stem cell
48 chr22:21810000-21811800 Enhancers Gastric stomach
49 chr22:21810200-21811000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr22:21810200-21811400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell

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