Variant report
| Variant | rs56163484 |
|---|---|
| Chromosome Location | chr12:75027733-75027734 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr12:74931443..74933195-chr12:75027637..75029931,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000257386 | Chromatin interaction |
| ENSG00000253719 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:10)
| rs_ID | r2[population] |
|---|---|
| rs55831933 | 1.00[AMR][1000 genomes] |
| rs7299112 | 1.00[AMR][1000 genomes] |
| rs74106016 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74106043 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74106044 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74106045 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74106046 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74106048 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7956761 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7968457 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
