Variant report
| Variant | rs56171142 |
|---|---|
| Chromosome Location | chr5:146811245-146811246 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:146798200-146815600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 2 | chr5:146799000-146818400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 3 | chr5:146803600-146811400 | Weak transcription | Fetal Intestine Small | intestine |
| 4 | chr5:146804400-146815800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 5 | chr5:146804800-146831600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 6 | chr5:146805800-146819200 | Enhancers | Colon Smooth Muscle | Colon |
| 7 | chr5:146806000-146812400 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 8 | chr5:146806000-146814800 | Enhancers | Fetal Brain Male | brain |
| 9 | chr5:146806800-146811400 | Enhancers | Rectal Smooth Muscle | rectum |
| 10 | chr5:146807600-146812800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 11 | chr5:146808000-146816200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 12 | chr5:146808200-146816400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 13 | chr5:146808200-146816600 | Weak transcription | Osteobl | bone |
| 14 | chr5:146808200-146818800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 15 | chr5:146809000-146811400 | Weak transcription | Pancreas | Pancrea |
| 16 | chr5:146809000-146816600 | Weak transcription | Esophagus | oesophagus |
| 17 | chr5:146809400-146811400 | Weak transcription | Right Atrium | heart |
| 18 | chr5:146809400-146819200 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 19 | chr5:146809800-146814000 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 20 | chr5:146810000-146823400 | Weak transcription | Small Intestine | intestine |
| 21 | chr5:146810200-146811600 | Enhancers | HSMMtube | muscle |
| 22 | chr5:146810200-146812000 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 23 | chr5:146810200-146812800 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 24 | chr5:146810400-146812200 | Enhancers | Fetal Muscle Leg | muscle |
| 25 | chr5:146810400-146812400 | Genic enhancers | iPS-20b Cell Line | embryonic stem cell |
| 26 | chr5:146810400-146813200 | Enhancers | Fetal Brain Female | brain |
| 27 | chr5:146810400-146815600 | Enhancers | Duodenum Smooth Muscle | Duodenum |
| 28 | chr5:146810600-146812200 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 29 | chr5:146810800-146811600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 30 | chr5:146810800-146811600 | Enhancers | Brain Anterior Caudate | brain |
| 31 | chr5:146810800-146811800 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 32 | chr5:146810800-146811800 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 33 | chr5:146810800-146811800 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 34 | chr5:146810800-146811800 | Genic enhancers | iPS-18 Cell Line | embryonic stem cell |
| 35 | chr5:146810800-146812000 | Enhancers | Brain Substantia Nigra | brain |
| 36 | chr5:146810800-146812200 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 37 | chr5:146810800-146812200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 38 | chr5:146810800-146812200 | Enhancers | Fetal Heart | heart |
| 39 | chr5:146810800-146812200 | Enhancers | Spleen | Spleen |
| 40 | chr5:146810800-146812400 | Enhancers | H1 Cell Line | embryonic stem cell |
| 41 | chr5:146810800-146812800 | Enhancers | H9 Cell Line | embryonic stem cell |
| 42 | chr5:146810800-146813400 | Enhancers | Ovary | ovary |
| 43 | chr5:146810800-146814200 | Enhancers | Fetal Intestine Large | intestine |
| 44 | chr5:146810800-146817600 | Genic enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 45 | chr5:146810800-146819400 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 46 | chr5:146810800-146822600 | Genic enhancers | HUES48 Cell Line | embryonic stem cell |
| 47 | chr5:146811000-146811600 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 48 | chr5:146811000-146812400 | Enhancers | Fetal Stomach | stomach |
| 49 | chr5:146811000-146813200 | Genic enhancers | Brain Germinal Matrix | brain |
| 50 | chr5:146811200-146811400 | Enhancers | Placenta Amnion | Placenta Amnion |
