Variant report

Variant rs56181361
Chromosome Location chr2:55344470-55344471
allele A/C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55337200-55351000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:55339400-55351000 Weak transcription H9 Cell Line embryonic stem cell
3 chr2:55339600-55345800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr2:55339600-55345800 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr2:55339600-55345800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr2:55339600-55346800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:55339600-55347000 Weak transcription Left Ventricle heart
8 chr2:55339800-55345600 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr2:55339800-55345800 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr2:55339800-55347000 Weak transcription Lung lung
11 chr2:55340000-55345600 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr2:55340200-55346200 Weak transcription Fetal Brain Female brain
13 chr2:55340400-55345800 Enhancers K562 blood
14 chr2:55340600-55345200 Weak transcription Fetal Brain Male brain
15 chr2:55340600-55347000 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr2:55340800-55344600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr2:55340800-55345600 Weak transcription Primary B cells from peripheral blood blood
18 chr2:55340800-55346000 Weak transcription Spleen Spleen
19 chr2:55340800-55347200 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr2:55340800-55348000 Enhancers Brain Hippocampus Middle brain
21 chr2:55340800-55348000 Enhancers Brain Substantia Nigra brain
22 chr2:55341000-55345800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr2:55341000-55346000 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr2:55341000-55346800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr2:55341000-55346800 Weak transcription Placenta Placenta
26 chr2:55341200-55345600 Weak transcription Primary B cells from cord blood blood
27 chr2:55341200-55345800 Enhancers Primary hematopoietic stem cells short term culture blood
28 chr2:55341200-55346200 Weak transcription Stomach Smooth Muscle stomach
29 chr2:55341200-55346800 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr2:55341200-55347000 Weak transcription Stomach Mucosa stomach
31 chr2:55341400-55345800 Weak transcription Adipose Nuclei Adipose
32 chr2:55341600-55345800 Weak transcription Fetal Thymus thymus
33 chr2:55341800-55344600 Enhancers NHDF-Ad bronchial
34 chr2:55342200-55346200 Enhancers Hela-S3 cervix
35 chr2:55342200-55347000 Enhancers HSMMtube muscle
36 chr2:55342400-55350200 Enhancers Fetal Heart heart
37 chr2:55342600-55344600 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr2:55342600-55344600 Enhancers NHEK skin
39 chr2:55343000-55344600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr2:55343000-55345400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
41 chr2:55343000-55346000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr2:55343200-55344800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr2:55343200-55345000 Enhancers A549 lung
44 chr2:55343200-55345600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr2:55343200-55345600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr2:55343200-55345600 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr2:55343200-55345800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr2:55343200-55345800 Weak transcription Brain Anterior Caudate brain
49 chr2:55343200-55346800 Weak transcription Right Atrium heart
50 chr2:55343200-55347200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

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