The 2.0 version of rSNPBase

Variant report

Variant rs56210063
Chromosome Location chr11:8789165-8789166
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8777400-8795800 Enhancers Rectal Smooth Muscle rectum
2 chr11:8779600-8799600 Weak transcription Fetal Brain Male brain
3 chr11:8780000-8792400 Weak transcription HepG2 liver
4 chr11:8781400-8794600 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr11:8782000-8791600 Enhancers Colon Smooth Muscle Colon
6 chr11:8783200-8790000 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr11:8784000-8790200 Weak transcription Small Intestine intestine
8 chr11:8784000-8794200 Weak transcription Colonic Mucosa Colon
9 chr11:8785000-8791400 Enhancers Skeletal Muscle Female skeletal muscle
10 chr11:8785200-8799400 Enhancers Fetal Heart heart
11 chr11:8786400-8794200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
12 chr11:8786600-8789200 Enhancers iPS-20b Cell Line embryonic stem cell
13 chr11:8786600-8789400 Enhancers HUES6 Cell Line embryonic stem cell
14 chr11:8786600-8789600 Enhancers Duodenum Smooth Muscle Duodenum
15 chr11:8786600-8789800 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr11:8786600-8790400 Enhancers ES-I3 Cell Line embryonic stem cell
17 chr11:8786600-8790400 Enhancers Cortex derived primary cultured neurospheres brain
18 chr11:8786600-8791200 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr11:8786600-8791200 Enhancers Placenta Amnion Placenta Amnion
20 chr11:8786600-8791400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr11:8786600-8791400 Enhancers Right Ventricle heart
22 chr11:8786600-8791600 Enhancers Left Ventricle heart
23 chr11:8786600-8791800 Enhancers NHDF-Ad bronchial
24 chr11:8786600-8791800 Enhancers NHLF lung
25 chr11:8786600-8795400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
26 chr11:8786600-8795400 Enhancers Stomach Mucosa stomach
27 chr11:8786600-8798000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr11:8786600-8803000 Enhancers Ovary ovary
29 chr11:8786800-8789400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr11:8786800-8789600 Enhancers Brain Cingulate Gyrus brain
31 chr11:8786800-8790800 Enhancers HUVEC blood vessel
32 chr11:8786800-8791200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr11:8786800-8792400 Enhancers HSMM muscle
34 chr11:8787000-8789600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
35 chr11:8787000-8790400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr11:8787000-8791000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr11:8787000-8791200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr11:8787000-8791400 Enhancers Muscle Satellite Cultured Cells --
39 chr11:8787000-8791800 Enhancers Fetal Muscle Leg muscle
40 chr11:8787000-8797800 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr11:8787200-8790200 Weak transcription A549 lung
42 chr11:8787400-8790000 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr11:8787600-8791400 Enhancers NHEK skin
44 chr11:8787600-8795000 Weak transcription Fetal Intestine Large intestine
45 chr11:8787800-8790400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr11:8787800-8790800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr11:8787800-8790800 Enhancers Liver Liver
48 chr11:8787800-8790800 Enhancers Spleen Spleen
49 chr11:8787800-8791400 Enhancers Esophagus oesophagus
50 chr11:8788000-8789400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015