The 2.0 version of rSNPBase

Variant report

Variant rs72858243
Chromosome Location chr11:8754559-8754560
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:8736200-8773800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr11:8744200-8757600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr11:8746200-8757400 Weak transcription H1 Cell Line embryonic stem cell
4 chr11:8746400-8757200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr11:8746600-8757200 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr11:8746600-8783000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr11:8747800-8756400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
8 chr11:8748800-8754600 Weak transcription Fetal Thymus thymus
9 chr11:8749400-8754600 Weak transcription Fetal Kidney kidney
10 chr11:8750800-8760200 Weak transcription Fetal Brain Male brain
11 chr11:8752000-8755800 Enhancers Right Atrium heart
12 chr11:8752400-8755200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
13 chr11:8752400-8755400 Weak transcription K562 blood
14 chr11:8752600-8754600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr11:8752600-8755800 Enhancers Right Ventricle heart
16 chr11:8752600-8756000 Enhancers Primary B cells from peripheral blood blood
17 chr11:8752600-8769800 Weak transcription Colonic Mucosa Colon
18 chr11:8752600-8775200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr11:8752800-8755600 Enhancers Colon Smooth Muscle Colon
20 chr11:8752800-8755600 Enhancers HSMMtube muscle
21 chr11:8752800-8755800 Enhancers Skeletal Muscle Female skeletal muscle
22 chr11:8752800-8758600 Enhancers Left Ventricle heart
23 chr11:8753000-8755200 Enhancers Adipose Nuclei Adipose
24 chr11:8753000-8755200 Enhancers Aorta Aorta
25 chr11:8753000-8755600 Genic enhancers Fetal Muscle Leg muscle
26 chr11:8753000-8755600 Enhancers Lung lung
27 chr11:8753000-8755600 Enhancers Pancreas Pancrea
28 chr11:8753000-8755600 Enhancers Osteobl bone
29 chr11:8753000-8755800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr11:8753000-8755800 Enhancers Ovary ovary
31 chr11:8753000-8755800 Enhancers Rectal Smooth Muscle rectum
32 chr11:8753000-8755800 Genic enhancers NHLF lung
33 chr11:8753000-8756000 Enhancers GM12878-XiMat blood
34 chr11:8753000-8756200 Enhancers Spleen Spleen
35 chr11:8753000-8756400 Enhancers Fetal Heart heart
36 chr11:8753000-8780600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr11:8753200-8754800 Genic enhancers Fetal Stomach stomach
38 chr11:8753200-8755600 Enhancers Esophagus oesophagus
39 chr11:8753200-8755800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
40 chr11:8753200-8755800 Enhancers Brain Substantia Nigra brain
41 chr11:8753200-8756000 Enhancers NHDF-Ad bronchial
42 chr11:8753200-8759600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr11:8753400-8754600 Enhancers Rectal Mucosa Donor 29 rectum
44 chr11:8753400-8755200 Enhancers Brain Hippocampus Middle brain
45 chr11:8753400-8755400 Enhancers Breast Myoepithelial Primary Cells Breast
46 chr11:8753400-8755400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr11:8753400-8755800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr11:8753400-8756000 Enhancers Liver Liver
49 chr11:8753400-8756000 Enhancers Duodenum Smooth Muscle Duodenum
50 chr11:8753400-8756000 Genic enhancers Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015