The 2.0 version of rSNPBase

Variant report

Variant rs56224440
Chromosome Location chr4:121827364-121827365
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:121798200-121842400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr4:121803400-121827400 Weak transcription NHDF-Ad bronchial
3 chr4:121804800-121830200 Weak transcription Fetal Heart heart
4 chr4:121812000-121831000 Weak transcription Muscle Satellite Cultured Cells --
5 chr4:121812000-121839400 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr4:121812400-121836600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr4:121812800-121839800 Weak transcription Psoas Muscle Psoas
8 chr4:121813000-121837400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr4:121813400-121839400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr4:121813400-121841600 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr4:121813600-121839800 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr4:121813800-121842400 Weak transcription NHEK skin
13 chr4:121814200-121839800 Weak transcription Pancreas Pancrea
14 chr4:121814600-121828600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr4:121814600-121829000 Weak transcription Ovary ovary
16 chr4:121814600-121830400 Weak transcription Lung lung
17 chr4:121814600-121836600 Weak transcription H9 Cell Line embryonic stem cell
18 chr4:121814600-121840000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr4:121814600-121842600 Weak transcription Right Ventricle heart
20 chr4:121814800-121828200 Weak transcription Colon Smooth Muscle Colon
21 chr4:121815200-121839800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr4:121818000-121842400 Weak transcription NH-A brain
23 chr4:121821000-121829200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr4:121821000-121839800 Weak transcription Fetal Muscle Leg muscle
25 chr4:121821200-121840000 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr4:121821400-121839800 Weak transcription Fetal Stomach stomach
27 chr4:121822400-121828000 Strong transcription iPS-20b Cell Line embryonic stem cell
28 chr4:121823400-121837800 Weak transcription Fetal Kidney kidney
29 chr4:121823600-121827800 Strong transcription HUES6 Cell Line embryonic stem cell
30 chr4:121823600-121827800 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr4:121823600-121836400 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr4:121823800-121827800 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr4:121823800-121842400 Weak transcription HSMM muscle
34 chr4:121824000-121828000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr4:121824000-121828000 Strong transcription HUES64 Cell Line embryonic stem cell
36 chr4:121824400-121827800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr4:121824800-121834200 Weak transcription Fetal Lung lung
38 chr4:121824800-121840400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr4:121825000-121830000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr4:121825000-121832800 Weak transcription Stomach Smooth Muscle stomach
41 chr4:121825000-121836800 Weak transcription H1 Cell Line embryonic stem cell
42 chr4:121825000-121839800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr4:121825000-121839800 Weak transcription Osteobl bone
44 chr4:121825000-121842600 Weak transcription Fetal Muscle Trunk muscle
45 chr4:121825200-121828000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr4:121825200-121828800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr4:121825200-121835000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr4:121825200-121838200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr4:121825200-121839200 Weak transcription Fetal Intestine Small intestine
50 chr4:121825200-121839800 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015