Variant report

Variant	rs562540871
Chromosome Location	chr6:31869734-31869735
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr6:31869637-31870338	A549	lung:	n/a	chr6:31869760-31869769 chr6:31870306-31870315 chr6:31869923-31869932 chr6:31869927-31869934
2	NFATC1	chr6:31869501-31870452	GM12878	blood:	n/a	n/a
3	PML	chr6:31869334-31870431	MCF-7	breast:	n/a	n/a
4	ELK1	chr6:31869711-31870126	K562	blood:	n/a	n/a
5	NRF1	chr6:31869443-31870746	SK-N-SH	brain:	n/a	chr6:31869711-31869722 chr6:31870177-31870191 chr6:31869711-31869720 chr6:31870060-31870071 chr6:31870059-31870070 chr6:31869711-31869725 chr6:31869708-31869722
6	TEAD4	chr6:31869647-31870552	K562	blood:	n/a	n/a
7	MAZ	chr6:31869261-31870511	Hela-S3	cervix:	n/a	chr6:31869760-31869769 chr6:31869513-31869523 chr6:31869608-31869619 chr6:31870306-31870315 chr6:31869923-31869932 chr6:31869927-31869934
8	BHLHE40	chr6:31869617-31870384	HepG2	liver:	n/a	chr6:31870210-31870226 chr6:31869776-31869792 chr6:31870202-31870218
9	EGR1	chr6:31869392-31869929	GM12878	blood:	n/a	chr6:31869780-31869793 chr6:31869469-31869484 chr6:31869779-31869794 chr6:31869758-31869771 chr6:31869783-31869792 chr6:31869759-31869770 chr6:31869760-31869770 chr6:31869761-31869770 chr6:31869543-31869553 chr6:31869758-31869772 chr6:31869780-31869793 chr6:31869758-31869771 chr6:31869569-31869584 chr6:31869776-31869798 chr6:31869514-31869524 chr6:31869760-31869770 chr6:31869783-31869793 chr6:31869780-31869793 chr6:31869712-31869721 chr6:31869470-31869483 chr6:31869759-31869770
10	STAT5A	chr6:31869086-31870196	GM12878	blood:	n/a	chr6:31869776-31869788 chr6:31869436-31869448 chr6:31869893-31869905 chr6:31869469-31869481 chr6:31869656-31869668
11	ZEB1	chr6:31869383-31869900	GM12878	blood:	n/a	chr6:31869607-31869616 chr6:31869609-31869616
12	BHLHE40	chr6:31869276-31870379	K562	blood:	n/a	chr6:31870210-31870226 chr6:31869776-31869792 chr6:31870202-31870218
13	RAD21	chr6:31869659-31870445	HepG2	liver:	n/a	chr6:31870213-31870226 chr6:31870212-31870224 chr6:31869664-31869677 chr6:31870214-31870224
14	RCOR1	chr6:31869282-31870644	IMR90	lung:	n/a	n/a
15	MYBL2	chr6:31869626-31870548	HepG2	liver:	n/a	n/a
16	RAD21	chr6:31869673-31870492	ECC-1	luminal epithelium:	n/a	chr6:31870213-31870226 chr6:31870212-31870224 chr6:31870214-31870224
17	POLR2A	chr6:31868928-31870632	HUVEC	blood vessel:	n/a	n/a
18	POLR2A	chr6:31868974-31870819	HL-60	blood:	n/a	n/a
19	SIN3AK20	chr6:31869730-31870402	HepG2	liver:	n/a	n/a
20	MAX	chr6:31868651-31870305	K562	blood:	n/a	chr6:31869760-31869769 chr6:31869513-31869523 chr6:31869608-31869619 chr6:31869923-31869932 chr6:31869927-31869934
21	E2F4	chr6:31869717-31870353	K562	blood:	n/a	chr6:31870103-31870112 chr6:31869783-31869793
22	POLR2A	chr6:31869341-31870397	GM15510	blood:	n/a	n/a
23	REST	chr6:31869658-31870315	SK-N-SH	brain:	n/a	chr6:31870264-31870277 chr6:31870121-31870134
24	E2F1	chr6:31869688-31870365	Hela-S3	cervix:	n/a	chr6:31869712-31869721 chr6:31870103-31870112 chr6:31869783-31869793
25	BACH1	chr6:31869336-31870597	H1-hESC	embryonic stem cell:	n/a	n/a
26	ELF1	chr6:31869646-31870350	HepG2	liver:	n/a	chr6:31870205-31870217 chr6:31869672-31869681
27	MAX	chr6:31868981-31870445	ECC-1	luminal epithelium:	n/a	chr6:31869760-31869769 chr6:31869513-31869523 chr6:31869608-31869619 chr6:31870306-31870315 chr6:31869923-31869932 chr6:31869927-31869934
28	EGR1	chr6:31869507-31870574	ECC-1	luminal epithelium:	n/a	chr6:31869780-31869793 chr6:31870061-31870070 chr6:31869779-31869794 chr6:31870103-31870113 chr6:31869758-31869771 chr6:31869783-31869792 chr6:31869759-31869770 chr6:31869760-31869770 chr6:31869761-31869770 chr6:31869543-31869553 chr6:31870181-31870190 chr6:31869758-31869772 chr6:31869780-31869793 chr6:31869758-31869771 chr6:31869569-31869584 chr6:31869776-31869798 chr6:31869514-31869524 chr6:31869760-31869770 chr6:31869783-31869793 chr6:31869780-31869793 chr6:31869712-31869721 chr6:31870179-31870188 chr6:31869759-31869770 chr6:31870062-31870071
29	ELF1	chr6:31869355-31870432	GM12878	blood:	n/a	chr6:31870205-31870217 chr6:31869672-31869681
30	JUN	chr6:31868159-31870923	K562	blood:	n/a	chr6:31870104-31870113 chr6:31869512-31869521 chr6:31869471-31869480
31	SIN3AK20	chr6:31868928-31870330	K562	blood:	n/a	n/a
32	CEBPD	chr6:31869135-31870391	K562	blood:	n/a	n/a
33	FOXA1	chr6:31869699-31870354	HepG2	liver:	n/a	n/a
34	PML	chr6:31869111-31870304	MCF-7	breast:	n/a	n/a
35	HNF4A	chr6:31869677-31870081	HepG2	liver:	n/a	n/a
36	PAX5	chr6:31869658-31870434	GM12878	blood:	n/a	chr6:31870179-31870188 chr6:31870181-31870190
37	E2F6	chr6:31869707-31870179	A549	lung:	n/a	chr6:31869712-31869721 chr6:31870103-31870112 chr6:31869783-31869793
38	NFIC	chr6:31869618-31870423	ECC-1	luminal epithelium:	n/a	n/a
39	POLR2A	chr6:31868725-31870941	Hela-S3	cervix:	n/a	n/a
40	JUND	chr6:31869638-31869989	H1-hESC	embryonic stem cell:	n/a	n/a
41	EP300	chr6:31869630-31870406	HepG2	liver:	n/a	chr6:31869660-31869676 chr6:31869708-31869724
42	POLR2A	chr6:31868709-31870502	Hela-S3	cervix:	n/a	n/a
43	GATA3	chr6:31869386-31870263	A549	lung:	n/a	n/a
44	POLR2A	chr6:31869666-31870413	GM12878	blood:	n/a	n/a
45	POLR2A	chr6:31869224-31870368	HUVEC	blood vessel:	n/a	n/a
46	POLR2A	chr6:31869346-31870530	H1-neurons	neurons:	n/a	n/a
47	POLR2A	chr6:31869144-31870403	A549	lung:	n/a	n/a
48	HCFC1	chr6:31868829-31871106	Hela-S3	cervix:	n/a	n/a
49	GABPA	chr6:31869632-31870299	MCF-7	breast:	n/a	chr6:31869711-31869722 chr6:31870177-31870191 chr6:31869711-31869720 chr6:31870060-31870071 chr6:31869711-31869725 chr6:31869708-31869722
50	EGR1	chr6:31869140-31870259	K562	blood:	n/a	chr6:31869780-31869793 chr6:31870061-31870070 chr6:31869469-31869484 chr6:31869779-31869794 chr6:31870103-31870113 chr6:31869758-31869771 chr6:31869783-31869792 chr6:31869759-31869770 chr6:31869760-31869770 chr6:31869761-31869770 chr6:31869543-31869553 chr6:31870181-31870190 chr6:31869758-31869772 chr6:31869780-31869793 chr6:31869758-31869771 chr6:31869569-31869584 chr6:31869776-31869798 chr6:31869514-31869524 chr6:31869760-31869770 chr6:31869783-31869793 chr6:31869780-31869793 chr6:31869712-31869721 chr6:31869288-31869298 chr6:31869470-31869483 chr6:31870179-31870188 chr6:31869759-31869770 chr6:31870062-31870071

No.	Distal block	Cell Line	Cell type
1	chr6:31864040..31872511-chr6:31917614..31930102,27	MCF-7	breast:
2	chr4:139163040..139163916-chr6:31869733..31870234,2	HCT-116	colon:
3	chr6:31794734..31796775-chr6:31868219..31871084,2	MCF-7	breast:
4	chr6:31761659..31763884-chr6:31868027..31870923,3	K562	blood:
5	chr6:31868623..31870778-chr6:31945874..31948322,2	K562	blood:
6	chr6:31869231..31871840-chr6:31901304..31905157,3	MCF-7	breast:
7	chr6:31846442..31848048-chr6:31868032..31869941,2	K562	blood:
8	chr6:31869703..31871388-chr6:31919073..31921188,2	K562	blood:
9	chr6:31867895..31873109-chr6:31925613..31930389,7	K562	blood:
10	chr6:31866210..31871385-chr6:31935988..31941288,8	K562	blood:
11	chr6:31509091..31511742-chr6:31868193..31871571,3	MCF-7	breast:
12	chr6:31827799..31831011-chr6:31868395..31870845,5	MCF-7	breast:
13	chr6:31742944..31744994-chr6:31869511..31871431,2	K562	blood:
14	chr6:31851397..31853749-chr6:31868487..31870497,2	MCF-7	breast:
15	chr6:31801616..31806746-chr6:31865132..31870777,8	MCF-7	breast:
16	chr6:31864133..31871768-chr6:31886295..31891953,13	MCF-7	breast:
17	chr6:31868360..31871056-chr6:32011358..32014091,3	K562	blood:
18	chr6:31867075..31869848-chr6:31926953..31928795,2	K562	blood:
19	chr6:31801352..31804698-chr6:31868339..31871951,3	K562	blood:
20	chr6:31798354..31804916-chr6:31860790..31871982,18	MCF-7	breast:
21	chr17:61904476..61906775-chr6:31869076..31871321,2	MCF-7	breast:
22	chr6:31868564..31871785-chr6:31887319..31890291,4	MCF-7	breast:
23	chr6:31627970..31635325-chr6:31864036..31871429,12	K562	blood:
24	chr6:31868360..31870239-chr6:32012136..32014091,2	K562	blood:
25	chr6:31795326..31798240-chr6:31869248..31870828,2	K562	blood:
26	chr6:31761659..31764051-chr6:31869423..31871582,3	K562	blood:
27	chr6:31868502..31871158-chr6:31911705..31915017,4	MCF-7	breast:
28	chr6:31860287..31862319-chr6:31868202..31870669,2	MCF-7	breast:
29	chr6:31631113..31634365-chr6:31867924..31871902,6	K562	blood:
30	chr6:31869193..31873526-chr6:31908186..31911581,4	MCF-7	breast:
31	chr6:31868614..31871551-chr6:31914927..31918494,4	K562	blood:
32	chr6:31867614..31871926-chr6:31937988..31942087,9	K562	blood:
33	chr17:56735218..56737822-chr6:31869690..31871981,3	MCF-7	breast:
34	chr6:31868706..31872478-chr6:31938286..31942065,5	MCF-7	breast:
35	chr6:31867879..31871842-chr6:31901664..31905567,4	MCF-7	breast:
36	chr6:31862879..31872535-chr6:31911667..31928766,47	MCF-7	breast:
37	chr6:31868781..31871119-chr6:31892943..31895660,2	MCF-7	breast:
38	chr6:31864068..31872693-chr6:31934470..31941847,12	MCF-7	breast:
39	chr6:31867782..31870627-chr6:32121344..32123906,2	K562	blood:

Variant related genes	Relation type
EHMT2	TF binding region
ENSG00000202077	Chromatin interaction
ENSG00000204435	Chromatin interaction
ENSG00000201207	Chromatin interaction
ENSG00000204351	Chromatin interaction
ENSG00000237080	Chromatin interaction
ENSG00000168477	Chromatin interaction
ENSG00000087191	Chromatin interaction
ENSG00000204396	Chromatin interaction
ENSG00000204438	Chromatin interaction
ENSG00000244255	Chromatin interaction
ENSG00000166278	Chromatin interaction
ENSG00000204388	Chromatin interaction
ENSG00000204348	Chromatin interaction
ENSG00000204314	Chromatin interaction
ENSG00000243649	Chromatin interaction
ENSG00000108592	Chromatin interaction
ENSG00000198563	Chromatin interaction
ENSG00000204371	Chromatin interaction
ENSG00000151012	Chromatin interaction
ENSG00000258388	Chromatin interaction
ENSG00000221267	Chromatin interaction
ENSG00000204387	Chromatin interaction
ENSG00000263020	Chromatin interaction
ENSG00000204356	Chromatin interaction
ENSG00000204344	Chromatin interaction
ENSG00000234006	Chromatin interaction
ENSG00000204439	Chromatin interaction
ENSG00000201823	Chromatin interaction
ENSG00000221988	Chromatin interaction
ENSG00000204385	Chromatin interaction
ENSG00000204394	Chromatin interaction
ENSG00000201754	Chromatin interaction
ENSG00000204386	Chromatin interaction

Extended variants
information (count: 51 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:51 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
2	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
3	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
4	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
5	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
6	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
7	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
8	nsv1021747	chr6:31386219-31907266	Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	330 gene(s)	inside rSNPs	diseases
9	nsv1033154	chr6:31550614-32009410	Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	326 gene(s)	inside rSNPs	diseases
10	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
11	esv3428142	chr6:31615800-31881809	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	257 gene(s)	inside rSNPs	diseases
12	nsv884428	chr6:31728102-31870326	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	162 gene(s)	inside rSNPs	diseases
13	nsv601950	chr6:31785438-32492308	Enhancers Bivalent Enhancer Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
14	nsv601951	chr6:31785438-32496748	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
15	nsv601955	chr6:31785453-32484368	Genic enhancers Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
16	nsv601956	chr6:31785453-32492308	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
17	nsv884472	chr6:31813898-31870856	Weak transcription Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
18	nsv508399	chr6:31829474-31902423	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
19	nsv884474	chr6:31836055-31870326	Genic enhancers Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
20	nsv462875	chr6:31838441-31907147	Strong transcription Genic enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
21	nsv601960	chr6:31838441-31907147	Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
22	nsv884475	chr6:31840625-31880320	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
23	nsv884476	chr6:31848000-31870326	Genic enhancers Active TSS Enhancers Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
24	nsv884477	chr6:31850724-31870326	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
25	nsv884478	chr6:31850724-31874505	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
26	nsv884479	chr6:31850724-31878433	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
27	nsv884480	chr6:31851234-31870856	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
28	nsv884481	chr6:31851234-31878433	Strong transcription Flanking Active TSS Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
29	nsv884482	chr6:31851234-31880320	Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
30	nsv966619	chr6:31852653-31870444	Flanking Active TSS Strong transcription Active TSS Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
31	nsv884484	chr6:31854543-31879158	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	50 gene(s)	inside rSNPs	diseases
32	nsv884485	chr6:31860576-31880320	Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
33	nsv884487	chr6:31861207-31870326	Enhancers Active TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
34	nsv884488	chr6:31861207-31870856	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
35	nsv884489	chr6:31861207-31870856	Strong transcription Flanking Active TSS Active TSS Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
36	nsv884490	chr6:31861207-31871485	Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
37	nsv884491	chr6:31861207-31872551	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
38	nsv884492	chr6:31861207-31874505	Enhancers Active TSS Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
39	nsv884493	chr6:31861207-31876647	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
40	nsv884494	chr6:31861207-31876647	Strong transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
41	nsv884495	chr6:31861207-31878433	Enhancers Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
42	nsv884496	chr6:31861207-31878495	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
43	nsv884497	chr6:31861207-31879158	Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
44	nsv884498	chr6:31861207-31880320	Flanking Active TSS Genic enhancers Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
45	nsv884499	chr6:31864304-31872551	Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
46	nsv884500	chr6:31864304-31873465	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
47	nsv884501	chr6:31864304-31874505	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
48	nsv884502	chr6:31864304-31876647	Enhancers Active TSS Genic enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	48 gene(s)	inside rSNPs	diseases
49	nsv10822	chr6:31866769-31871690	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	45 gene(s)	inside rSNPs	diseases
50	nsv601961	chr6:31868322-32484368	Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	126 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31868600-31870200	Active TSS	HUES64 Cell Line	embryonic stem cell
2	chr6:31868600-31870400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr6:31868800-31869800	Transcr. at gene 5' and 3'	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr6:31868800-31870400	Active TSS	H9 Cell Line	embryonic stem cell
5	chr6:31868800-31870400	Active TSS	iPS-15b Cell Line	embryonic stem cell
6	chr6:31868800-31870400	Active TSS	Fetal Kidney	kidney
7	chr6:31868800-31870400	Active TSS	Rectal Mucosa Donor 29	rectum
8	chr6:31868800-31870400	Active TSS	Hela-S3	cervix
9	chr6:31868800-31870400	Active TSS	HSMMtube	muscle
10	chr6:31868800-31870400	Active TSS	Osteobl	bone
11	chr6:31868800-31870600	Active TSS	Rectal Smooth Muscle	rectum
12	chr6:31868800-31870800	Active TSS	HSMM	muscle
13	chr6:31869000-31870200	Active TSS	Primary hematopoietic stem cells	blood
14	chr6:31869000-31870400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr6:31869000-31870400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr6:31869000-31870400	Active TSS	iPS-18 Cell Line	embryonic stem cell
17	chr6:31869000-31870400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr6:31869000-31870400	Active TSS	Primary B cells from peripheral blood	blood
19	chr6:31869000-31870400	Active TSS	Brain Angular Gyrus	brain
20	chr6:31869000-31870400	Transcr. at gene 5' and 3'	Right Atrium	heart
21	chr6:31869000-31870600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
22	chr6:31869000-31870600	Active TSS	Pancreatic Islets	Pancreatic Islet
23	chr6:31869000-31870600	Active TSS	Ovary	ovary
24	chr6:31869000-31870800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr6:31869000-31870800	Active TSS	Psoas Muscle	Psoas
26	chr6:31869200-31869800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
27	chr6:31869200-31870200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr6:31869200-31870200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
29	chr6:31869200-31870200	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr6:31869200-31870200	Active TSS	Muscle Satellite Cultured Cells	--
31	chr6:31869200-31870200	Active TSS	Duodenum Mucosa	Duodenum
32	chr6:31869200-31870200	Active TSS	Rectal Mucosa Donor 31	rectum
33	chr6:31869200-31870200	Active TSS	Skeletal Muscle Female	skeletal muscle
34	chr6:31869200-31870200	Active TSS	K562	blood
35	chr6:31869200-31870200	Active TSS	NHEK	skin
36	chr6:31869200-31870200	Active TSS	NHLF	lung
37	chr6:31869200-31870400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
38	chr6:31869200-31870400	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr6:31869200-31870400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr6:31869200-31870400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr6:31869200-31870400	Active TSS	HUES6 Cell Line	embryonic stem cell
42	chr6:31869200-31870400	Active TSS	iPS-20b Cell Line	embryonic stem cell
43	chr6:31869200-31870400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr6:31869200-31870400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr6:31869200-31870400	Active TSS	Breast Myoepithelial Primary Cells	Breast
46	chr6:31869200-31870400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr6:31869200-31870400	Active TSS	Brain Anterior Caudate	brain
48	chr6:31869200-31870400	Active TSS	Brain Cingulate Gyrus	brain
49	chr6:31869200-31870400	Active TSS	Brain Hippocampus Middle	brain
50	chr6:31869200-31870400	Active TSS	Brain Inferior Temporal Lobe	brain

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