Variant report

Variant rs562558047
Chromosome Location chr8:54995182-54995183
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:54946400-54999200 Weak transcription NHDF-Ad bronchial
2 chr8:54949800-54999400 Weak transcription NHLF lung
3 chr8:54956000-54999000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr8:54957600-55009800 Weak transcription Brain Inferior Temporal Lobe brain
5 chr8:54963200-54999200 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr8:54963200-54999200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr8:54963200-54999200 Weak transcription Colonic Mucosa Colon
8 chr8:54963200-54999200 Weak transcription Small Intestine intestine
9 chr8:54963400-54999200 Weak transcription HSMMtube muscle
10 chr8:54963800-54999200 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr8:54966200-54997600 Weak transcription Pancreas Pancrea
12 chr8:54966400-55007600 Weak transcription Psoas Muscle Psoas
13 chr8:54966400-55012800 Weak transcription Fetal Kidney kidney
14 chr8:54966600-55012800 Weak transcription Rectal Smooth Muscle rectum
15 chr8:54967200-54999200 Weak transcription Ovary ovary
16 chr8:54974400-54999200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr8:54974600-54997400 Weak transcription Spleen Spleen
18 chr8:54974600-54999200 Weak transcription Right Ventricle heart
19 chr8:54974800-54999200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr8:54974800-55002200 Weak transcription Gastric stomach
21 chr8:54975600-55012800 Weak transcription Stomach Smooth Muscle stomach
22 chr8:54975800-54999200 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr8:54975800-54999600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr8:54982600-54999400 Weak transcription HSMM muscle
25 chr8:54983800-54999200 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr8:54984000-55005800 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr8:54985000-54999200 Weak transcription Fetal Brain Female brain
28 chr8:54986000-54997600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr8:54986000-54999200 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr8:54986200-55000000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr8:54988000-54999000 Weak transcription Placenta Amnion Placenta Amnion
32 chr8:54989200-54999200 Weak transcription Colon Smooth Muscle Colon
33 chr8:54989400-54995200 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr8:54989400-54996400 Strong transcription A549 lung
35 chr8:54989600-54995200 Strong transcription Primary hematopoietic stem cells short term culture blood
36 chr8:54989600-54999000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr8:54990000-54995400 Strong transcription HUES64 Cell Line embryonic stem cell
38 chr8:54990000-54999000 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr8:54990400-54999200 Weak transcription HMEC breast
40 chr8:54990800-54996400 Strong transcription iPS-20b Cell Line embryonic stem cell
41 chr8:54991000-54996200 Strong transcription K562 blood
42 chr8:54991200-54995200 Strong transcription HUES48 Cell Line embryonic stem cell
43 chr8:54991200-54998000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr8:54991200-54999200 Weak transcription Aorta Aorta
45 chr8:54991400-54995200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr8:54991600-54995200 Strong transcription Primary hematopoietic stem cells blood
47 chr8:54991800-54999200 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr8:54991800-54999200 Weak transcription Muscle Satellite Cultured Cells --
49 chr8:54991800-54999200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr8:54992000-54996000 Strong transcription HUES6 Cell Line embryonic stem cell

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