Variant report

Variant rs56273742
Chromosome Location chr20:25032538-25032539
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25016600-25034800 Weak transcription A549 lung
2 chr20:25017800-25034200 Weak transcription Fetal Kidney kidney
3 chr20:25020600-25037400 Enhancers Psoas Muscle Psoas
4 chr20:25021200-25032600 Weak transcription NHDF-Ad bronchial
5 chr20:25022200-25033000 Weak transcription Brain Germinal Matrix brain
6 chr20:25024400-25032600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr20:25024400-25032600 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr20:25024400-25033000 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr20:25024600-25033200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr20:25026400-25032600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr20:25026400-25033000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr20:25026400-25034600 Enhancers Fetal Heart heart
13 chr20:25027800-25037000 Weak transcription Placenta Amnion Placenta Amnion
14 chr20:25028400-25034800 Enhancers Left Ventricle heart
15 chr20:25028600-25033600 Enhancers Right Atrium heart
16 chr20:25028600-25037200 Genic enhancers Primary T cells fromperipheralblood blood
17 chr20:25028800-25032600 Weak transcription Primary hematopoietic stem cells blood
18 chr20:25028800-25036600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr20:25028800-25037200 Enhancers Aorta Aorta
20 chr20:25029000-25034200 Enhancers Brain Substantia Nigra brain
21 chr20:25029000-25034600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
22 chr20:25029000-25036800 Enhancers Right Ventricle heart
23 chr20:25029200-25033000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr20:25029200-25033000 Weak transcription Fetal Thymus thymus
25 chr20:25029200-25034000 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr20:25029200-25034200 Enhancers Brain Cingulate Gyrus brain
27 chr20:25029200-25037200 Enhancers Fetal Muscle Trunk muscle
28 chr20:25029400-25033000 Weak transcription Primary T regulatory cells fromperipheralblood blood
29 chr20:25029400-25034200 Enhancers Brain Angular Gyrus brain
30 chr20:25030000-25032600 Genic enhancers Primary B cells from peripheral blood blood
31 chr20:25030000-25032800 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr20:25030200-25033400 Enhancers Brain Inferior Temporal Lobe brain
33 chr20:25030400-25033200 Genic enhancers Pancreas Pancrea
34 chr20:25030800-25032600 Enhancers Skeletal Muscle Female skeletal muscle
35 chr20:25031000-25032600 Genic enhancers Primary T helper naive cells fromperipheralblood blood
36 chr20:25031000-25033000 Strong transcription Primary monocytes fromperipheralblood blood
37 chr20:25031000-25034000 Enhancers Brain Anterior Caudate brain
38 chr20:25031200-25033400 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
39 chr20:25031200-25033400 Genic enhancers Brain Hippocampus Middle brain
40 chr20:25031200-25033400 Strong transcription Dnd41 blood
41 chr20:25031200-25033800 Enhancers Colonic Mucosa Colon
42 chr20:25031400-25032800 Genic enhancers Primary B cells from cord blood blood
43 chr20:25031600-25033000 Genic enhancers Duodenum Mucosa Duodenum
44 chr20:25031600-25033000 Enhancers Stomach Smooth Muscle stomach
45 chr20:25031600-25035000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
46 chr20:25031800-25032600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
47 chr20:25031800-25033600 Enhancers Primary T helper 17 cells PMA-I stimulated --
48 chr20:25031800-25035800 Enhancers Rectal Mucosa Donor 31 rectum
49 chr20:25031800-25037000 Enhancers Primary T helper cells fromperipheralblood blood
50 chr20:25032000-25032600 Strong transcription Primary T cells from cord blood blood

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