Variant report

Variant rs73341122
Chromosome Location chr20:25227374-25227375
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25217600-25227600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr20:25219000-25227400 Weak transcription Colon Smooth Muscle Colon
3 chr20:25219400-25227600 Weak transcription Brain Inferior Temporal Lobe brain
4 chr20:25219400-25228000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr20:25219800-25227400 Weak transcription NHLF lung
6 chr20:25220400-25227400 Weak transcription Esophagus oesophagus
7 chr20:25222000-25227400 Weak transcription Fetal Kidney kidney
8 chr20:25222000-25227400 Weak transcription HSMMtube muscle
9 chr20:25222000-25227600 Weak transcription Fetal Lung lung
10 chr20:25222400-25227400 Weak transcription NH-A brain
11 chr20:25223200-25227400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr20:25223400-25227400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr20:25223600-25227800 Weak transcription Brain Germinal Matrix brain
14 chr20:25223800-25227600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr20:25226000-25227400 Enhancers Hela-S3 cervix
16 chr20:25226200-25227600 Enhancers Fetal Intestine Large intestine
17 chr20:25226200-25227600 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr20:25226200-25227600 Enhancers GM12878-XiMat blood
19 chr20:25226600-25227400 Weak transcription HUVEC blood vessel
20 chr20:25226600-25227600 Enhancers Fetal Intestine Small intestine
21 chr20:25226800-25227400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr20:25226800-25227400 Enhancers Muscle Satellite Cultured Cells --
23 chr20:25226800-25227400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr20:25226800-25227600 Enhancers Right Ventricle heart
25 chr20:25226800-25227800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr20:25226800-25227800 Flanking Active TSS A549 lung
27 chr20:25226800-25228000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr20:25226800-25228000 Flanking Active TSS HMEC breast
29 chr20:25227000-25227400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr20:25227000-25227400 Enhancers Dnd41 blood
31 chr20:25227000-25227400 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr20:25227000-25227400 Enhancers Osteobl bone
33 chr20:25227000-25227600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr20:25227000-25227600 Bivalent Enhancer iPS-20b Cell Line embryonic stem cell
35 chr20:25227000-25227600 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr20:25227000-25227600 Enhancers Liver Liver
37 chr20:25227000-25227600 Enhancers Left Ventricle heart
38 chr20:25227000-25227600 Enhancers Pancreas Pancrea
39 chr20:25227000-25227600 Enhancers HSMM muscle
40 chr20:25227000-25227600 Enhancers K562 blood
41 chr20:25227000-25227600 Enhancers NHDF-Ad bronchial
42 chr20:25227000-25227800 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr20:25227000-25227800 Bivalent Enhancer Primary B cells from peripheral blood blood
44 chr20:25227000-25227800 Enhancers Thymus Thymus
45 chr20:25227000-25228000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr20:25227000-25228000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr20:25227000-25228000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
48 chr20:25227000-25228000 Flanking Active TSS NHEK skin
49 chr20:25227000-25228400 Flanking Active TSS Adipose Nuclei Adipose
50 chr20:25227000-25228600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin

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