Variant report

Variant rs73333541
Chromosome Location chr20:25413904-25413905
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25388800-25418000 Weak transcription Gastric stomach
2 chr20:25389000-25433600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr20:25389200-25415000 Weak transcription Primary B cells from cord blood blood
4 chr20:25389400-25422800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr20:25389600-25426400 Weak transcription NH-A brain
6 chr20:25389600-25426600 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr20:25389600-25432200 Weak transcription Fetal Brain Male brain
8 chr20:25389800-25417000 Weak transcription Fetal Heart heart
9 chr20:25389800-25417600 Weak transcription HSMM muscle
10 chr20:25389800-25432600 Weak transcription Esophagus oesophagus
11 chr20:25390000-25434800 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr20:25390200-25416200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr20:25390400-25417400 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr20:25390600-25426200 Weak transcription Duodenum Mucosa Duodenum
15 chr20:25390600-25433400 Weak transcription Brain Germinal Matrix brain
16 chr20:25391000-25418400 Strong transcription Primary hematopoietic stem cells short term culture blood
17 chr20:25391600-25416000 Strong transcription HUES64 Cell Line embryonic stem cell
18 chr20:25391600-25416200 Strong transcription HUES48 Cell Line embryonic stem cell
19 chr20:25392200-25430800 Strong transcription Dnd41 blood
20 chr20:25393200-25416400 Strong transcription iPS-20b Cell Line embryonic stem cell
21 chr20:25393400-25416000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr20:25393400-25416400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr20:25393600-25416400 Strong transcription HUES6 Cell Line embryonic stem cell
24 chr20:25394200-25416200 Strong transcription H1 Cell Line embryonic stem cell
25 chr20:25395000-25416200 Strong transcription iPS-18 Cell Line embryonic stem cell
26 chr20:25398800-25429800 Weak transcription Hela-S3 cervix
27 chr20:25399600-25417600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr20:25399800-25415000 Weak transcription Primary monocytes fromperipheralblood blood
29 chr20:25399800-25417800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr20:25399800-25433600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr20:25399800-25434800 Weak transcription NHLF lung
32 chr20:25400000-25417600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr20:25402800-25445200 Weak transcription NHDF-Ad bronchial
34 chr20:25403200-25417800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr20:25405000-25416200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr20:25405200-25420200 Strong transcription HepG2 liver
37 chr20:25406000-25417200 Weak transcription Placenta Amnion Placenta Amnion
38 chr20:25406000-25432600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr20:25406800-25426600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr20:25407200-25417000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr20:25407800-25416200 Strong transcription A549 lung
42 chr20:25408200-25415000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr20:25408400-25415200 Weak transcription HUVEC blood vessel
44 chr20:25408400-25425000 Weak transcription Osteobl bone
45 chr20:25408800-25417800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr20:25409000-25427000 Weak transcription Muscle Satellite Cultured Cells --
47 chr20:25409000-25432800 Weak transcription K562 blood
48 chr20:25410400-25417400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr20:25410800-25425200 Weak transcription Fetal Intestine Large intestine
50 chr20:25411000-25415200 Weak transcription iPS-15b Cell Line embryonic stem cell

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