Variant report

Variant rs73345021
Chromosome Location chr20:25291625-25291626
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25256000-25299400 Weak transcription Fetal Brain Male brain
2 chr20:25278800-25305600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr20:25284600-25304000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr20:25286800-25292200 Strong transcription Dnd41 blood
5 chr20:25288400-25294400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr20:25289200-25292600 Enhancers Stomach Mucosa stomach
7 chr20:25289200-25304600 Weak transcription Primary neutrophils fromperipheralblood blood
8 chr20:25289400-25292200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
9 chr20:25289400-25292600 Enhancers Sigmoid Colon Sigmoid Colon
10 chr20:25289400-25302400 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr20:25289600-25292200 Flanking Active TSS A549 lung
12 chr20:25289600-25292400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr20:25289600-25293000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr20:25289800-25292200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr20:25289800-25292200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr20:25289800-25292200 Flanking Active TSS Osteobl bone
17 chr20:25289800-25292600 Enhancers Fetal Adrenal Gland Adrenal Gland
18 chr20:25289800-25299400 Weak transcription Brain Germinal Matrix brain
19 chr20:25290000-25292200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr20:25290000-25292200 Flanking Active TSS Duodenum Mucosa Duodenum
21 chr20:25290000-25292200 Enhancers Placenta Amnion Placenta Amnion
22 chr20:25290000-25292200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
23 chr20:25290000-25292200 Enhancers HUVEC blood vessel
24 chr20:25290000-25292400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr20:25290000-25292400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr20:25290000-25292400 Enhancers Primary Natural Killer cells fromperipheralblood blood
27 chr20:25290000-25292400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
28 chr20:25290000-25292400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
29 chr20:25290000-25292600 Enhancers Fetal Intestine Small intestine
30 chr20:25290000-25294400 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr20:25290200-25292000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr20:25290200-25292000 Flanking Active TSS HepG2 liver
33 chr20:25290200-25292000 Flanking Active TSS HSMM muscle
34 chr20:25290200-25292200 Enhancers Right Ventricle heart
35 chr20:25290200-25292200 Flanking Active TSS HSMMtube muscle
36 chr20:25290200-25292400 Enhancers Esophagus oesophagus
37 chr20:25290200-25292400 Enhancers Left Ventricle heart
38 chr20:25290200-25292400 Enhancers Lung lung
39 chr20:25290200-25292600 Enhancers Placenta Placenta
40 chr20:25290200-25292800 Enhancers Fetal Thymus thymus
41 chr20:25290200-25293000 Enhancers Spleen Spleen
42 chr20:25290200-25297000 Weak transcription Fetal Brain Female brain
43 chr20:25290400-25291800 Enhancers Pancreas Pancrea
44 chr20:25290400-25292000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
45 chr20:25290400-25292000 Flanking Active TSS NH-A brain
46 chr20:25290400-25292000 Flanking Active TSS NHLF lung
47 chr20:25290400-25292400 Enhancers Primary hematopoietic stem cells short term culture blood
48 chr20:25290400-25292400 Genic enhancers Fetal Stomach stomach
49 chr20:25290400-25292400 Enhancers Gastric stomach
50 chr20:25290400-25292400 Enhancers Ovary ovary

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