Variant report

Variant rs56322140
Chromosome Location chr1:10714294-10714295
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10651600-10715800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:10697400-10722000 Strong transcription Sigmoid Colon Sigmoid Colon
3 chr1:10698800-10726400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:10698800-10752000 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr1:10699000-10723000 Weak transcription Psoas Muscle Psoas
6 chr1:10700400-10722800 Weak transcription Ovary ovary
7 chr1:10702600-10721600 Strong transcription Skeletal Muscle Female skeletal muscle
8 chr1:10704400-10720400 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr1:10705400-10725800 Weak transcription HMEC breast
10 chr1:10706200-10715400 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr1:10706400-10724000 Weak transcription Primary B cells from peripheral blood blood
12 chr1:10706600-10719200 Weak transcription Primary B cells from cord blood blood
13 chr1:10706600-10723200 Weak transcription Right Atrium heart
14 chr1:10707800-10731200 Weak transcription NHEK skin
15 chr1:10708000-10719200 Weak transcription Stomach Mucosa stomach
16 chr1:10708400-10718400 Weak transcription Primary T cells from cord blood blood
17 chr1:10710200-10723400 Weak transcription Brain Anterior Caudate brain
18 chr1:10710600-10721600 Strong transcription Esophagus oesophagus
19 chr1:10711400-10722000 Strong transcription Spleen Spleen
20 chr1:10711600-10716000 Strong transcription Thymus Thymus
21 chr1:10711600-10726600 Strong transcription Duodenum Mucosa Duodenum
22 chr1:10711600-10728400 Weak transcription H9 Cell Line embryonic stem cell
23 chr1:10711800-10720800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
24 chr1:10711800-10721400 Weak transcription Fetal Kidney kidney
25 chr1:10712000-10714800 Genic enhancers Gastric stomach
26 chr1:10712000-10716600 Strong transcription Left Ventricle heart
27 chr1:10712000-10720600 Strong transcription Skeletal Muscle Male skeletal muscle
28 chr1:10712000-10721400 Strong transcription Fetal Intestine Small intestine
29 chr1:10712000-10721600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:10712000-10723000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr1:10712200-10714800 Strong transcription Colonic Mucosa Colon
32 chr1:10712200-10715000 Strong transcription Rectal Mucosa Donor 31 rectum
33 chr1:10712200-10715400 Weak transcription Fetal Heart heart
34 chr1:10712200-10718800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr1:10712200-10723400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:10712400-10714600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:10712400-10714800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
38 chr1:10712400-10714800 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
39 chr1:10712400-10715000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
40 chr1:10712400-10717200 Strong transcription Fetal Muscle Leg muscle
41 chr1:10712400-10717400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:10712400-10717600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr1:10712400-10719400 Strong transcription Lung lung
44 chr1:10712400-10722000 Weak transcription Fetal Lung lung
45 chr1:10712600-10715800 Strong transcription Primary neutrophils fromperipheralblood blood
46 chr1:10712600-10719200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr1:10712600-10737000 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr1:10712800-10714400 Genic enhancers Right Ventricle heart
49 chr1:10712800-10714600 Genic enhancers Rectal Smooth Muscle rectum
50 chr1:10712800-10714800 Genic enhancers Fetal Adrenal Gland Adrenal Gland

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