Variant report

Variant	rs72858516
Chromosome Location	chr1:10705860-10705861
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:61)
Chromatin interactive
region (count:3)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:10705842-10705892	HEK293	kidney:	embryo
2	chr1:10705842-10705892	MCF-7	breast:	n/a
3	chr1:10705842-10705892	GM12891	blood:	n/a
4	chr1:10705842-10705892	Jurkat	blood:	n/a
5	chr1:10705842-10705892	HepG2	liver:	n/a
6	chr1:10705842-10705892	ovcar-3	ovarian:	n/a
7	chr1:10705842-10705892	MCF10A-Er-Src	breast:	n/a
8	chr1:10705842-10705892	HRCEpiC	kidney:	n/a
9	chr1:10705842-10705892	GM12892	blood:	n/a
10	chr1:10705842-10705892	NHBE	bronchial:	n/a
11	chr1:10705842-10705892	CMK	blood:	n/a
12	chr1:10705842-10705892	AG10803	skin:	n/a
13	chr1:10705842-10705892	HMEC	breast:	n/a
14	chr1:10705842-10705892	BE2_C	brain:	n/a
15	chr1:10705842-10705892	PFSK-1	brain:	n/a
16	chr1:10705842-10705892	LNCaP	prostate:	n/a
17	chr1:10705842-10705892	HAEpiC	amniotic membrane:	n/a
18	chr1:10705842-10705892	HL-60	blood:	n/a
19	chr1:10705842-10705892	HIPEpiC	eye:	n/a
20	chr1:10705842-10705892	RPTEC	kidney:	n/a
21	chr1:10705842-10705892	NB4	blood:	n/a
22	chr1:10705842-10705892	Hela-S3	cervix:	n/a
23	chr1:10705842-10705892	AG04449	skin:	fetal
24	chr1:10705842-10705892	BJ	skin:	n/a
25	chr1:10705842-10705892	GM19239	blood:	n/a
26	chr1:10705842-10705892	HRE	kidney:	n/a
27	chr1:10705842-10705892	HRPEpiC	eye:	n/a
28	chr1:10705842-10705892	PANC-1	pancreas:	n/a
29	chr1:10705842-10705892	HUVEC	blood vessel:	n/a
30	chr1:10705842-10705892	A549	lung:	n/a
31	chr1:10705842-10705892	HEEpiC	esophagus:	n/a
32	chr1:10705842-10705892	HPAEpiC	pulmonary alveolar:	n/a
33	chr1:10705842-10705892	K562	blood:	n/a
34	chr1:10705842-10705892	SK-N-SH_RA	brain:	n/a
35	chr1:10705842-10705892	HCF	heart:	n/a
36	chr1:10705842-10705892	SK-N-MC	brain:	n/a
37	chr1:10705842-10705892	HCPEpiC	choroid plexus:	n/a
38	chr1:10705842-10705892	H1-hESC	embryonic stem cell:	embryo
39	chr1:10705842-10705892	HCT-116	colon:	n/a
40	chr1:10705842-10705892	SK-N-SH	brain:	n/a
41	chr1:10705842-10705892	NH-A	brain:	n/a
42	chr1:10705842-10705892	Hepatocyte	liver:	n/a
43	chr1:10705842-10705892	Caco-2	colon:	n/a
44	chr1:10705842-10705892	PrEC	prostate:	n/a
45	chr1:10705842-10705892	HNPCEpiC	eye:	n/a
46	chr1:10705842-10705892	AoSMC	blood vessel:	n/a
47	chr1:10705842-10705892	HCM	heart:	n/a
48	chr1:10705842-10705892	ECC-1	luminal epithelium:	n/a
49	chr1:10705842-10705892	NT2-D1	testis:	n/a
50	chr1:10705842-10705892	T-47D	breast:	n/a

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:10698140..10700728-chr1:10703080..10705863,3	K562	blood:
2	chr1:10703574..10707168-chr1:10709558..10711927,3	MCF-7	breast:
3	chr1:10705750..10708723-chr1:10731868..10733988,2	K562	blood:

No data

Variant related genes	Relation type
CASZ1	CpG island
ENSG00000272078	Chromatin interaction
ENSG00000130940	Chromatin interaction

Extended variants
information (count: 82 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10157038	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12567769	0.82[EUR][1000 genomes]
rs17035539	0.82[EUR][1000 genomes]
rs17035541	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17035543	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17035549	1.00[EUR][1000 genomes]
rs56229092	0.91[ASN][1000 genomes]
rs56322140	0.91[ASN][1000 genomes]
rs57026192	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57160339	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58140483	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58229713	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59304342	0.82[EUR][1000 genomes]
rs59985166	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60449700	0.82[EUR][1000 genomes]
rs72858515	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72858521	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7545505	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:64 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1008021	chr1:10363794-10802633	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
2	nsv1010424	chr1:10667559-10747891	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv464394	chr1:10673094-10767902	Enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv545396	chr1:10673094-10767902	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	esv1828181	chr1:10673130-10829937	Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
6	nsv464505	chr1:10673194-10767785	Strong transcription Weak transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
7	nsv545397	chr1:10673194-10767785	Active TSS Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
8	nsv464616	chr1:10673194-10767902	Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
9	nsv545398	chr1:10673194-10767902	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
10	nsv464727	chr1:10673194-10777260	Bivalent Enhancer ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
11	nsv545399	chr1:10673194-10777260	Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
12	nsv1003427	chr1:10675978-10727284	Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
13	nsv1010420	chr1:10675978-10747891	Weak transcription Genic enhancers Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
14	nsv1004063	chr1:10675978-10780682	Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
15	nsv1014003	chr1:10675978-10788624	Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
16	nsv1014818	chr1:10675978-10846823	Weak transcription Enhancers Genic enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
17	esv29966	chr1:10676800-10874152	Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
18	nsv828030	chr1:10677562-10795161	Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
19	nsv871824	chr1:10684098-10743363	Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
20	nsv871950	chr1:10684098-10750432	Bivalent/Poised TSS Enhancers Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
21	nsv870683	chr1:10684098-10757199	Enhancers Strong transcription Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
22	nsv871361	chr1:10684098-10767785	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
23	nsv871290	chr1:10684098-10777260	Flanking Active TSS ZNF genes & repeats Strong transcription Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
24	nsv871191	chr1:10684098-10796866	Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
25	nsv464838	chr1:10684098-10842021	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
26	nsv545400	chr1:10684098-10842021	Genic enhancers Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
27	nsv534857	chr1:10688713-10714182	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
28	nsv1001806	chr1:10688713-10727284	Bivalent Enhancer Enhancers Genic enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
29	nsv998197	chr1:10688713-10742654	Weak transcription Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
30	nsv534858	chr1:10688713-10742654	Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
31	nsv997631	chr1:10688713-10747891	Strong transcription Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
32	nsv1015054	chr1:10688713-10780682	Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
33	nsv1006689	chr1:10688713-10822684	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
34	nsv871478	chr1:10689942-10766466	Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
35	nsv871156	chr1:10690948-10750432	Weak transcription Enhancers Bivalent Enhancer Active TSS Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
36	nsv464949	chr1:10690948-10757199	Bivalent Enhancer Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
37	nsv545401	chr1:10690948-10757199	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
38	nsv465061	chr1:10690948-10796866	Weak transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
39	nsv545402	chr1:10690948-10796866	Weak transcription Bivalent Enhancer Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
40	nsv871070	chr1:10690948-10796866	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
41	nsv871737	chr1:10693294-10757199	Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
42	nsv870483	chr1:10694125-10750432	Enhancers Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
43	nsv870460	chr1:10694125-10757199	Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
44	nsv870923	chr1:10694125-10801585	Strong transcription Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
45	nsv525693	chr1:10694125-10840905	Bivalent/Poised TSS Weak transcription Active TSS Genic enhancers Enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
46	nsv870849	chr1:10694125-10894724	Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
47	nsv529981	chr1:10697093-11353487	Weak transcription Enhancers Strong transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	68 gene(s)	inside rSNPs	diseases
48	nsv828364	chr1:10697810-10764164	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
49	nsv1012022	chr1:10698017-10727284	Strong transcription Weak transcription Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
50	nsv534859	chr1:10698017-10727284	Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:68 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:10651600-10715800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr1:10691600-10706000	Weak transcription	Dnd41	blood
3	chr1:10697400-10722000	Strong transcription	Sigmoid Colon	Sigmoid Colon
4	chr1:10698200-10713600	Weak transcription	Small Intestine	intestine
5	chr1:10698800-10726400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
6	chr1:10698800-10752000	Weak transcription	Primary T helper cells fromperipheralblood	blood
7	chr1:10699000-10712400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr1:10699000-10713600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
9	chr1:10699000-10714000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
10	chr1:10699000-10723000	Weak transcription	Psoas Muscle	Psoas
11	chr1:10699400-10709600	Strong transcription	Duodenum Mucosa	Duodenum
12	chr1:10699400-10709800	Strong transcription	Colonic Mucosa	Colon
13	chr1:10700000-10706200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr1:10700000-10707600	Weak transcription	Primary T cells from cord blood	blood
15	chr1:10700200-10708600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr1:10700200-10709400	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr1:10700400-10722800	Weak transcription	Ovary	ovary
18	chr1:10701000-10706200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
19	chr1:10701200-10706200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr1:10701200-10706200	Weak transcription	Right Atrium	heart
21	chr1:10701400-10708600	Weak transcription	Adipose Nuclei	Adipose
22	chr1:10701400-10708800	Weak transcription	Brain Germinal Matrix	brain
23	chr1:10701400-10709400	Strong transcription	Rectal Mucosa Donor 31	rectum
24	chr1:10701600-10709400	Strong transcription	Rectal Mucosa Donor 29	rectum
25	chr1:10701600-10709800	Strong transcription	Pancreas	Pancrea
26	chr1:10701800-10706200	Strong transcription	Left Ventricle	heart
27	chr1:10701800-10708200	Strong transcription	Aorta	Aorta
28	chr1:10701800-10709400	Strong transcription	Fetal Intestine Small	intestine
29	chr1:10702000-10706400	Strong transcription	Thymus	Thymus
30	chr1:10702200-10706200	Strong transcription	Gastric	stomach
31	chr1:10702200-10706200	Strong transcription	Right Ventricle	heart
32	chr1:10702200-10709800	Strong transcription	Fetal Intestine Large	intestine
33	chr1:10702600-10706600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
34	chr1:10702600-10707200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
35	chr1:10702600-10721600	Strong transcription	Skeletal Muscle Female	skeletal muscle
36	chr1:10703000-10706200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
37	chr1:10703000-10706400	Strong transcription	Primary B cells from peripheral blood	blood
38	chr1:10703000-10706400	Strong transcription	Primary T cells fromperipheralblood	blood
39	chr1:10703200-10707800	Strong transcription	Duodenum Smooth Muscle	Duodenum
40	chr1:10703400-10706200	Strong transcription	Spleen	Spleen
41	chr1:10703400-10706600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
42	chr1:10703400-10706800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
43	chr1:10703400-10707800	Strong transcription	Colon Smooth Muscle	Colon
44	chr1:10703400-10711800	Weak transcription	Fetal Heart	heart
45	chr1:10703600-10708600	Genic enhancers	Fetal Muscle Leg	muscle
46	chr1:10703800-10706000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr1:10704400-10706200	Strong transcription	Lung	lung
48	chr1:10704400-10707400	Strong transcription	Fetal Stomach	stomach
49	chr1:10704400-10720400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
50	chr1:10704600-10706200	Strong transcription	Primary T helper cells PMA-I stimulated	--

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