Variant report

Variant rs57160339
Chromosome Location chr1:10729095-10729096
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10698800-10752000 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr1:10707800-10731200 Weak transcription NHEK skin
3 chr1:10712600-10737000 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr1:10714400-10729200 Weak transcription Primary hematopoietic stem cells blood
5 chr1:10714600-10730200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr1:10714600-10731400 Weak transcription Small Intestine intestine
7 chr1:10722800-10730000 Enhancers Liver Liver
8 chr1:10722800-10731000 Weak transcription Primary B cells from cord blood blood
9 chr1:10722800-10753000 Weak transcription Primary T cells from cord blood blood
10 chr1:10723200-10732200 Enhancers Placenta Placenta
11 chr1:10723200-10734200 Bivalent Enhancer Fetal Muscle Trunk muscle
12 chr1:10724200-10734000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:10724200-10743200 Enhancers Fetal Heart heart
14 chr1:10724800-10730800 Weak transcription Brain Germinal Matrix brain
15 chr1:10725200-10730200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr1:10725400-10730600 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr1:10725600-10729400 Enhancers Stomach Mucosa stomach
18 chr1:10725600-10729600 Enhancers Left Ventricle heart
19 chr1:10725600-10731400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr1:10725600-10736600 Weak transcription Primary T cells fromperipheralblood blood
21 chr1:10725600-10739200 Weak transcription Thymus Thymus
22 chr1:10725800-10731200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:10725800-10732600 Bivalent Enhancer Fetal Muscle Leg muscle
24 chr1:10726000-10732000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr1:10726000-10734400 Enhancers Fetal Lung lung
26 chr1:10726200-10729200 Genic enhancers Fetal Intestine Small intestine
27 chr1:10726200-10729200 Enhancers Psoas Muscle Psoas
28 chr1:10726400-10729200 Enhancers Fetal Intestine Large intestine
29 chr1:10726400-10732000 Enhancers Skeletal Muscle Female skeletal muscle
30 chr1:10726400-10741600 Weak transcription Brain Hippocampus Middle brain
31 chr1:10726400-10750000 Weak transcription Primary B cells from peripheral blood blood
32 chr1:10726600-10731000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr1:10727200-10735400 Enhancers Rectal Smooth Muscle rectum
34 chr1:10727400-10729200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr1:10727400-10729400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:10727400-10729400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr1:10727600-10735800 Weak transcription Esophagus oesophagus
38 chr1:10728000-10729400 Enhancers H1 Cell Line embryonic stem cell
39 chr1:10728000-10729800 Enhancers HUES6 Cell Line embryonic stem cell
40 chr1:10728000-10731600 Enhancers Duodenum Smooth Muscle Duodenum
41 chr1:10728200-10729200 Enhancers HUES64 Cell Line embryonic stem cell
42 chr1:10728200-10729400 Strong transcription Duodenum Mucosa Duodenum
43 chr1:10728200-10729400 Enhancers Right Atrium heart
44 chr1:10728200-10729600 Flanking Active TSS Stomach Smooth Muscle stomach
45 chr1:10728200-10729800 Enhancers Breast Myoepithelial Primary Cells Breast
46 chr1:10728200-10732000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
47 chr1:10728200-10732200 Enhancers Right Ventricle heart
48 chr1:10728200-10732400 Bivalent Enhancer Fetal Stomach stomach
49 chr1:10728400-10729200 Enhancers Aorta Aorta
50 chr1:10728400-10729400 Genic enhancers Pancreas Pancrea

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