Variant report

Variant rs60449700
Chromosome Location chr1:10752990-10752991
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10722800-10753000 Weak transcription Primary T cells from cord blood blood
2 chr1:10738000-10753400 Enhancers Stomach Mucosa stomach
3 chr1:10738800-10753000 Enhancers Left Ventricle heart
4 chr1:10741800-10753600 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:10741800-10753600 Enhancers Skeletal Muscle Female skeletal muscle
6 chr1:10742400-10753200 Enhancers Psoas Muscle Psoas
7 chr1:10745000-10753400 Enhancers Fetal Adrenal Gland Adrenal Gland
8 chr1:10747000-10753800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:10747800-10753000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr1:10747800-10753600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:10748000-10753400 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr1:10748200-10753200 Weak transcription HSMMtube muscle
13 chr1:10748400-10753600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:10748800-10753200 Weak transcription Aorta Aorta
15 chr1:10749200-10753200 Weak transcription Primary monocytes fromperipheralblood blood
16 chr1:10750600-10753600 Enhancers Sigmoid Colon Sigmoid Colon
17 chr1:10751200-10753600 Enhancers Primary T cells fromperipheralblood blood
18 chr1:10751400-10753000 Enhancers Primary T helper cells PMA-I stimulated --
19 chr1:10751400-10753000 Enhancers Placenta Placenta
20 chr1:10751400-10753200 Flanking Active TSS Stomach Smooth Muscle stomach
21 chr1:10751400-10753400 Enhancers Primary Natural Killer cells fromperipheralblood blood
22 chr1:10751600-10753000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:10751600-10753400 Enhancers Fetal Thymus thymus
24 chr1:10751600-10753600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr1:10751800-10753200 Enhancers Primary B cells from peripheral blood blood
26 chr1:10752000-10753000 Enhancers Primary T helper cells fromperipheralblood blood
27 chr1:10752000-10753000 Enhancers Thymus Thymus
28 chr1:10752000-10753200 Enhancers Primary hematopoietic stem cells blood
29 chr1:10752000-10753400 Enhancers Primary B cells from cord blood blood
30 chr1:10752000-10753400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr1:10752000-10753400 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr1:10752000-10753400 Flanking Active TSS GM12878-XiMat blood
33 chr1:10752000-10753400 Flanking Active TSS HepG2 liver
34 chr1:10752000-10753600 Enhancers Primary T killer memory cells from peripheral blood blood
35 chr1:10752000-10753600 Bivalent Enhancer Fetal Muscle Trunk muscle
36 chr1:10752000-10755600 Active TSS Colon Smooth Muscle Colon
37 chr1:10752200-10753000 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
38 chr1:10752200-10753000 Enhancers Primary T regulatory cells fromperipheralblood blood
39 chr1:10752200-10753000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr1:10752200-10753000 Enhancers Fetal Lung lung
41 chr1:10752200-10753200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
42 chr1:10752200-10753200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr1:10752200-10753200 Bivalent Enhancer Fetal Muscle Leg muscle
44 chr1:10752200-10753200 Enhancers HMEC breast
45 chr1:10752200-10753400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
46 chr1:10752200-10753400 Flanking Active TSS Fetal Intestine Small intestine
47 chr1:10752200-10753600 Enhancers Adipose Nuclei Adipose
48 chr1:10752200-10753600 Weak transcription K562 blood
49 chr1:10752400-10753000 Enhancers Dnd41 blood
50 chr1:10752400-10753200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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