Variant report

Variant	rs56327757
Chromosome Location	chr14:65315157-65315158
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:65312151..65316310-chr14:65346214..65348556,3	K562	blood:
2	chr14:65310132..65313690-chr14:65314321..65317713,3	K562	blood:
3	chr14:65315035..65317899-chr14:65322274..65327051,4	MCF-7	breast:
4	chr14:65313751..65315359-chr14:65318780..65321450,2	MCF-7	breast:
5	chr14:65313975..65316632-chr14:65343546..65346097,2	MCF-7	breast:
6	chr14:65307862..65310367-chr14:65313110..65315645,2	MCF-7	breast:
7	chr14:65310132..65314457-chr14:65315119..65319141,7	K562	blood:
8	chr14:65313283..65315169-chr14:65321927..65324245,2	K562	blood:

No data

No data

No data

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17102223	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17102244	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1951496	0.85[EUR][1000 genomes]
rs72726243	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72726248	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72726253	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72726254	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3693408	chr14:65292670-65358576	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65311800-65318200	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr14:65312800-65316600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr14:65313400-65315400	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr14:65314400-65317400	Enhancers	GM12878-XiMat	blood
5	chr14:65314600-65318800	Weak transcription	Right Atrium	heart
6	chr14:65314800-65316000	Weak transcription	Left Ventricle	heart
7	chr14:65314800-65317000	Weak transcription	Psoas Muscle	Psoas
8	chr14:65314800-65318000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr14:65314800-65318800	Weak transcription	Fetal Heart	heart
10	chr14:65314800-65319000	Weak transcription	Right Ventricle	heart
11	chr14:65315000-65315200	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr14:65315000-65318800	Weak transcription	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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