Variant report

Variant rs56335268
Chromosome Location chr3:99650217-99650218
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:99640400-99656000 Weak transcription GM12878-XiMat blood
2 chr3:99640400-99656600 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr3:99640400-99656800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr3:99641400-99654200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr3:99642200-99654000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr3:99644800-99653800 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr3:99644800-99663200 Weak transcription Esophagus oesophagus
8 chr3:99645200-99653800 Weak transcription NHLF lung
9 chr3:99645200-99654200 Weak transcription Small Intestine intestine
10 chr3:99645200-99656800 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr3:99645400-99653800 Weak transcription NHDF-Ad bronchial
12 chr3:99646000-99653400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr3:99646000-99656400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr3:99647400-99650400 Enhancers ES-I3 Cell Line embryonic stem cell
15 chr3:99647400-99650600 Enhancers HUES6 Cell Line embryonic stem cell
16 chr3:99647400-99650600 Enhancers HUES64 Cell Line embryonic stem cell
17 chr3:99647400-99650600 Enhancers iPS-15b Cell Line embryonic stem cell
18 chr3:99647600-99650600 Enhancers HUES48 Cell Line embryonic stem cell
19 chr3:99647600-99650600 Enhancers iPS-18 Cell Line embryonic stem cell
20 chr3:99647800-99650600 Enhancers iPS-20b Cell Line embryonic stem cell
21 chr3:99648400-99650400 Enhancers A549 lung
22 chr3:99648400-99650600 Enhancers HepG2 liver
23 chr3:99648400-99650800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr3:99648600-99654000 Weak transcription Ovary ovary
25 chr3:99648600-99656400 Weak transcription Fetal Brain Male brain
26 chr3:99648800-99650600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr3:99648800-99651600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr3:99648800-99651600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr3:99648800-99654200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr3:99648800-99656800 Weak transcription Fetal Heart heart
31 chr3:99648800-99656800 Weak transcription Psoas Muscle Psoas
32 chr3:99648800-99663200 Weak transcription Gastric stomach
33 chr3:99648800-99664000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr3:99649000-99653000 Weak transcription Placenta Amnion Placenta Amnion
35 chr3:99649000-99653800 Weak transcription Muscle Satellite Cultured Cells --
36 chr3:99649000-99656200 Weak transcription NH-A brain
37 chr3:99649200-99653800 Weak transcription Osteobl bone
38 chr3:99649400-99652600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr3:99649400-99653800 Weak transcription Brain Hippocampus Middle brain
40 chr3:99649400-99653800 Weak transcription Fetal Lung lung
41 chr3:99649400-99654200 Weak transcription Brain Anterior Caudate brain
42 chr3:99649400-99656200 Weak transcription HSMM muscle
43 chr3:99649400-99656400 Weak transcription Brain Angular Gyrus brain
44 chr3:99649600-99650600 Enhancers Stomach Smooth Muscle stomach
45 chr3:99649600-99653600 Weak transcription Brain Substantia Nigra brain
46 chr3:99649600-99653800 Weak transcription Adipose Nuclei Adipose
47 chr3:99649600-99653800 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr3:99649600-99654000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr3:99649600-99654200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr3:99649600-99654200 Weak transcription Stomach Mucosa stomach

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