The 2.0 version of rSNPBase

Variant report

Variant rs56360277
Chromosome Location chr18:29714241-29714242
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:29673800-29715200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr18:29673800-29715200 Weak transcription Lung lung
3 chr18:29673800-29715800 Weak transcription Colonic Mucosa Colon
4 chr18:29673800-29717000 Weak transcription HSMMtube muscle
5 chr18:29675000-29717200 Weak transcription NH-A brain
6 chr18:29676800-29717200 Weak transcription Brain Germinal Matrix brain
7 chr18:29677000-29715600 Weak transcription Fetal Heart heart
8 chr18:29677000-29717000 Weak transcription Aorta Aorta
9 chr18:29691400-29715000 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr18:29695800-29715200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr18:29695800-29717600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr18:29699600-29715400 Weak transcription Left Ventricle heart
13 chr18:29704200-29714600 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr18:29705400-29715400 Weak transcription Fetal Kidney kidney
15 chr18:29705400-29716400 Weak transcription Stomach Smooth Muscle stomach
16 chr18:29705400-29717800 Weak transcription A549 lung
17 chr18:29705800-29715200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr18:29706200-29715200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr18:29706200-29715600 Weak transcription Fetal Muscle Leg muscle
20 chr18:29706200-29718600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr18:29707200-29715200 Weak transcription Fetal Lung lung
22 chr18:29707400-29718400 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr18:29707800-29717200 Weak transcription HSMM muscle
24 chr18:29708000-29715000 Weak transcription Placenta Placenta
25 chr18:29708800-29715000 Weak transcription Pancreas Pancrea
26 chr18:29709200-29717400 Weak transcription Brain Substantia Nigra brain
27 chr18:29709200-29718200 Weak transcription K562 blood
28 chr18:29709200-29718400 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr18:29709200-29718800 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr18:29709600-29716400 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr18:29709600-29719600 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr18:29710800-29714600 Weak transcription Osteobl bone
33 chr18:29710800-29716200 Weak transcription Muscle Satellite Cultured Cells --
34 chr18:29711400-29714400 Strong transcription Primary T cells fromperipheralblood blood
35 chr18:29711600-29718200 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr18:29711600-29718400 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr18:29712000-29718600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr18:29712200-29714800 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr18:29712200-29714800 Strong transcription Fetal Intestine Small intestine
40 chr18:29712200-29715000 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr18:29712200-29715400 Weak transcription Fetal Brain Female brain
42 chr18:29712400-29714400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr18:29712400-29714400 Weak transcription Primary hematopoietic stem cells blood
44 chr18:29712400-29714800 Weak transcription Hela-S3 cervix
45 chr18:29712400-29715000 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr18:29712400-29715200 Weak transcription Fetal Muscle Trunk muscle
47 chr18:29712400-29716000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr18:29712400-29716400 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr18:29712400-29717200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr18:29712400-29717400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015