Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:159899659..159901437-chr6:159947768..159949336,2	K562	blood:
2	chr6:159900057..159902903-chr6:159903417..159904968,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs16890441	0.98[EUR][1000 genomes]
rs2100338	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4709340	0.98[EUR][1000 genomes]
rs55875257	0.87[EUR][1000 genomes]
rs59722191	0.98[EUR][1000 genomes]
rs73585056	0.98[EUR][1000 genomes]
rs73585061	0.98[EUR][1000 genomes]
rs73585064	0.95[EUR][1000 genomes]
rs73586917	0.95[EUR][1000 genomes]
rs73586920	0.95[EUR][1000 genomes]
rs73586921	0.91[EUR][1000 genomes]
rs73586924	0.91[EUR][1000 genomes]
rs73586925	0.91[EUR][1000 genomes]
rs73586928	0.89[EUR][1000 genomes]
rs73586930	0.90[EUR][1000 genomes]
rs73586931	0.89[EUR][1000 genomes]
rs73586936	0.89[EUR][1000 genomes]
rs7742825	0.95[EUR][1000 genomes]
rs7743711	0.87[EUR][1000 genomes]
rs7760303	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030483	chr6:159475679-159910480	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv538490	chr6:159475679-159910480	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
3	esv2763604	chr6:159509373-159942955	Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
4	nsv1019191	chr6:159555100-160043247	Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:159900600-159902400	Enhancers	Placenta Amnion	Placenta Amnion

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