Variant report

Variant	rs56393602
Chromosome Location	chr4:60552375-60552376
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs55699291	1.00[AMR][1000 genomes]
rs56700262	1.00[AMR][1000 genomes]
rs57463164	1.00[AMR][1000 genomes]
rs57628077	1.00[AMR][1000 genomes]
rs58084437	1.00[AMR][1000 genomes]
rs73198592	1.00[AMR][1000 genomes]
rs73200956	1.00[AMR][1000 genomes]
rs73204901	1.00[AMR][1000 genomes]
rs73204902	1.00[AMR][1000 genomes]
rs73820666	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs996995	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2760852	chr4:60424576-60863454	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv594254	chr4:60529232-60609054	Enhancers Active TSS Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv980424	chr4:60543627-60561102	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:60552000-60554600	Weak transcription	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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