The 2.0 version of rSNPBase

Variant report

Variant rs56407729
Chromosome Location chr2:39035029-39035030
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39005800-39037400 Weak transcription Esophagus oesophagus
2 chr2:39006000-39037600 Weak transcription Aorta Aorta
3 chr2:39006000-39037600 Weak transcription Gastric stomach
4 chr2:39006400-39037800 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr2:39006400-39045600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr2:39006400-39085600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr2:39006600-39038200 Weak transcription Rectal Smooth Muscle rectum
8 chr2:39009000-39037400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr2:39009200-39037600 Weak transcription H1 Cell Line embryonic stem cell
10 chr2:39009200-39037600 Weak transcription Primary hematopoietic stem cells blood
11 chr2:39009200-39037600 Weak transcription Brain Inferior Temporal Lobe brain
12 chr2:39009200-39037600 Weak transcription Placenta Amnion Placenta Amnion
13 chr2:39009200-39037600 Weak transcription NHDF-Ad bronchial
14 chr2:39009200-39037800 Weak transcription NHEK skin
15 chr2:39009200-39042600 Weak transcription Fetal Kidney kidney
16 chr2:39009200-39050000 Weak transcription HMEC breast
17 chr2:39009200-39052800 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr2:39009400-39037600 Weak transcription NHLF lung
19 chr2:39009600-39037600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr2:39009600-39037600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr2:39012000-39037600 Weak transcription Pancreas Pancrea
22 chr2:39012200-39037600 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr2:39017600-39042200 Weak transcription Small Intestine intestine
24 chr2:39018400-39037600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr2:39019000-39057800 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr2:39021400-39038000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr2:39021600-39038000 Weak transcription Colonic Mucosa Colon
28 chr2:39022000-39042600 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr2:39022000-39066800 Weak transcription Stomach Mucosa stomach
30 chr2:39022400-39037400 Weak transcription Duodenum Mucosa Duodenum
31 chr2:39024000-39053000 Weak transcription Psoas Muscle Psoas
32 chr2:39025400-39038000 Weak transcription HUVEC blood vessel
33 chr2:39025600-39037600 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr2:39025600-39042400 Weak transcription Hela-S3 cervix
35 chr2:39025600-39042400 Weak transcription HSMM muscle
36 chr2:39025800-39037400 Weak transcription Liver Liver
37 chr2:39025800-39037800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr2:39026000-39037600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr2:39026600-39079800 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr2:39030000-39037400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr2:39030000-39040800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr2:39030200-39037400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:39030200-39037400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr2:39030200-39037600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr2:39030600-39037400 Weak transcription Spleen Spleen
46 chr2:39030600-39037600 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr2:39030600-39037600 Weak transcription Brain Hippocampus Middle brain
48 chr2:39030600-39037600 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr2:39030600-39088200 Weak transcription Fetal Heart heart
50 chr2:39032400-39037000 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015