The 2.0 version of rSNPBase

Variant report

Variant rs60895887
Chromosome Location chr2:39031299-39031300
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39005800-39037400 Weak transcription Esophagus oesophagus
2 chr2:39006000-39037600 Weak transcription Aorta Aorta
3 chr2:39006000-39037600 Weak transcription Gastric stomach
4 chr2:39006200-39031800 Weak transcription Right Ventricle heart
5 chr2:39006400-39037800 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr2:39006400-39045600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr2:39006400-39085600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr2:39006600-39031600 Weak transcription Muscle Satellite Cultured Cells --
9 chr2:39006600-39032200 Weak transcription Colon Smooth Muscle Colon
10 chr2:39006600-39033600 Weak transcription GM12878-XiMat blood
11 chr2:39006600-39038200 Weak transcription Rectal Smooth Muscle rectum
12 chr2:39006800-39031800 Weak transcription Fetal Brain Male brain
13 chr2:39009000-39037400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr2:39009200-39032000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr2:39009200-39032000 Weak transcription K562 blood
16 chr2:39009200-39032400 Weak transcription Primary B cells from cord blood blood
17 chr2:39009200-39032400 Weak transcription Brain Angular Gyrus brain
18 chr2:39009200-39037600 Weak transcription H1 Cell Line embryonic stem cell
19 chr2:39009200-39037600 Weak transcription Primary hematopoietic stem cells blood
20 chr2:39009200-39037600 Weak transcription Brain Inferior Temporal Lobe brain
21 chr2:39009200-39037600 Weak transcription Placenta Amnion Placenta Amnion
22 chr2:39009200-39037600 Weak transcription NHDF-Ad bronchial
23 chr2:39009200-39037800 Weak transcription NHEK skin
24 chr2:39009200-39042600 Weak transcription Fetal Kidney kidney
25 chr2:39009200-39050000 Weak transcription HMEC breast
26 chr2:39009200-39052800 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr2:39009400-39037600 Weak transcription NHLF lung
28 chr2:39009600-39031800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr2:39009600-39037600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr2:39009600-39037600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr2:39012000-39037600 Weak transcription Pancreas Pancrea
32 chr2:39012200-39037600 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr2:39017600-39042200 Weak transcription Small Intestine intestine
34 chr2:39018400-39037600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr2:39019000-39057800 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr2:39021400-39038000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr2:39021600-39038000 Weak transcription Colonic Mucosa Colon
38 chr2:39021800-39031800 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr2:39022000-39042600 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr2:39022000-39066800 Weak transcription Stomach Mucosa stomach
41 chr2:39022400-39037400 Weak transcription Duodenum Mucosa Duodenum
42 chr2:39023000-39031800 Weak transcription Ovary ovary
43 chr2:39024000-39053000 Weak transcription Psoas Muscle Psoas
44 chr2:39024200-39033000 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr2:39024400-39034400 Strong transcription Breast Myoepithelial Primary Cells Breast
46 chr2:39024600-39031800 Weak transcription NH-A brain
47 chr2:39024600-39033200 Strong transcription Fetal Muscle Trunk muscle
48 chr2:39025400-39031800 Weak transcription HepG2 liver
49 chr2:39025400-39032000 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr2:39025400-39038000 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015