The 2.0 version of rSNPBase

Variant report

Variant rs56410144
Chromosome Location chr15:92650646-92650647
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:92626000-92651000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr15:92639400-92661600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr15:92640000-92652600 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr15:92640400-92652400 Enhancers Fetal Thymus thymus
5 chr15:92641000-92657200 Weak transcription Pancreas Pancrea
6 chr15:92641000-92663600 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr15:92641400-92660000 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr15:92641400-92660400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr15:92641400-92660400 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr15:92641600-92651800 Weak transcription Fetal Brain Female brain
11 chr15:92641600-92665000 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr15:92642400-92665000 Weak transcription Gastric stomach
13 chr15:92642600-92651000 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr15:92642600-92656600 Weak transcription Aorta Aorta
15 chr15:92642800-92653400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr15:92643000-92658000 Weak transcription Liver Liver
17 chr15:92643800-92676000 Strong transcription Primary monocytes fromperipheralblood blood
18 chr15:92644200-92650800 Weak transcription Fetal Brain Male brain
19 chr15:92645000-92679800 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr15:92645200-92656800 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr15:92645200-92705600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr15:92645400-92655800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr15:92645400-92659800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr15:92645400-92663400 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr15:92645400-92665000 Weak transcription Primary hematopoietic stem cells blood
26 chr15:92645400-92665000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr15:92645600-92654600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr15:92645800-92654400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
29 chr15:92646000-92651400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr15:92646000-92656200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr15:92646200-92652600 Weak transcription Brain Inferior Temporal Lobe brain
32 chr15:92646200-92654000 Weak transcription Brain Angular Gyrus brain
33 chr15:92646200-92658000 Weak transcription H9 Cell Line embryonic stem cell
34 chr15:92647000-92652600 Weak transcription Brain Cingulate Gyrus brain
35 chr15:92647200-92651600 Weak transcription Brain Substantia Nigra brain
36 chr15:92647400-92652600 Strong transcription Primary T helper cells fromperipheralblood blood
37 chr15:92647600-92658600 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr15:92647600-92663600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr15:92647800-92650800 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr15:92647800-92656000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr15:92647800-92659200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr15:92648000-92652800 Enhancers Fetal Stomach stomach
43 chr15:92648000-92655800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr15:92648200-92692600 Weak transcription NHLF lung
45 chr15:92648400-92652400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr15:92648600-92651400 Strong transcription Primary T cells fromperipheralblood blood
47 chr15:92648600-92655800 Enhancers Fetal Heart heart
48 chr15:92648600-92660600 Weak transcription HMEC breast
49 chr15:92648800-92650800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr15:92649000-92651400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015