The 2.0 version of rSNPBase

Variant report

Variant rs59643016
Chromosome Location chr15:92648074-92648075
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:92626000-92651000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr15:92631400-92648800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr15:92636000-92648600 Weak transcription Adipose Nuclei Adipose
4 chr15:92639400-92661600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr15:92640000-92652600 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr15:92640400-92652400 Enhancers Fetal Thymus thymus
7 chr15:92640800-92648400 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr15:92640800-92648400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr15:92641000-92648800 Weak transcription Esophagus oesophagus
10 chr15:92641000-92657200 Weak transcription Pancreas Pancrea
11 chr15:92641000-92663600 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr15:92641400-92660000 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr15:92641400-92660400 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr15:92641400-92660400 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr15:92641600-92649800 Weak transcription Stomach Smooth Muscle stomach
16 chr15:92641600-92651800 Weak transcription Fetal Brain Female brain
17 chr15:92641600-92665000 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr15:92642200-92649800 Weak transcription Fetal Intestine Small intestine
19 chr15:92642400-92648800 Weak transcription Right Ventricle heart
20 chr15:92642400-92665000 Weak transcription Gastric stomach
21 chr15:92642600-92648600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr15:92642600-92648800 Weak transcription Left Ventricle heart
23 chr15:92642600-92648800 Weak transcription HSMMtube muscle
24 chr15:92642600-92651000 Weak transcription ES-WA7 Cell Line embryonic stem cell
25 chr15:92642600-92656600 Weak transcription Aorta Aorta
26 chr15:92642800-92653400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr15:92643000-92658000 Weak transcription Liver Liver
28 chr15:92643800-92676000 Strong transcription Primary monocytes fromperipheralblood blood
29 chr15:92644200-92650800 Weak transcription Fetal Brain Male brain
30 chr15:92645000-92679800 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr15:92645200-92648600 Weak transcription Primary T cells fromperipheralblood blood
32 chr15:92645200-92656800 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr15:92645200-92705600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr15:92645400-92649000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr15:92645400-92649800 Weak transcription Primary T cells from cord blood blood
36 chr15:92645400-92655800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr15:92645400-92659800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr15:92645400-92663400 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr15:92645400-92665000 Weak transcription Primary hematopoietic stem cells blood
40 chr15:92645400-92665000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr15:92645600-92648800 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr15:92645600-92654600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr15:92645800-92654400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
44 chr15:92646000-92648600 Weak transcription Brain Anterior Caudate brain
45 chr15:92646000-92648800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr15:92646000-92649600 Strong transcription Spleen Spleen
47 chr15:92646000-92651400 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr15:92646000-92656200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr15:92646200-92648600 Weak transcription Fetal Heart heart
50 chr15:92646200-92652600 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015