Variant report

Variant rs565599
Chromosome Location chr6:31798593-31798594
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31795800-31798800 Weak transcription Spleen Spleen
2 chr6:31797200-31798600 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:31797200-31798600 Active TSS Primary hematopoietic stem cells short term culture blood
4 chr6:31797200-31798600 Active TSS Primary T helper naive cells from peripheral blood blood
5 chr6:31797200-31798600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr6:31797200-31798600 Active TSS Muscle Satellite Cultured Cells --
7 chr6:31797200-31798600 Active TSS Brain Anterior Caudate brain
8 chr6:31797200-31798600 Active TSS Colon Smooth Muscle Colon
9 chr6:31797200-31798600 Active TSS Fetal Lung lung
10 chr6:31797200-31798600 Active TSS Placenta Placenta
11 chr6:31797200-31798600 Active TSS Fetal Stomach stomach
12 chr6:31797200-31798600 Active TSS Rectal Mucosa Donor 29 rectum
13 chr6:31797200-31798600 Active TSS Right Atrium heart
14 chr6:31797200-31798600 Active TSS Skeletal Muscle Female skeletal muscle
15 chr6:31797200-31798600 Active TSS Stomach Smooth Muscle stomach
16 chr6:31797200-31798600 Active TSS Hela-S3 cervix
17 chr6:31797200-31798600 Active TSS NH-A brain
18 chr6:31797200-31798600 Active TSS NHDF-Ad bronchial
19 chr6:31797200-31798800 Active TSS H1 Cell Line embryonic stem cell
20 chr6:31797200-31798800 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr6:31797200-31798800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr6:31797200-31798800 Active TSS HUES6 Cell Line embryonic stem cell
23 chr6:31797200-31798800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
24 chr6:31797200-31798800 Active TSS iPS-18 Cell Line embryonic stem cell
25 chr6:31797200-31798800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
26 chr6:31797200-31798800 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
27 chr6:31797200-31798800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr6:31797200-31798800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr6:31797200-31798800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr6:31797200-31798800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr6:31797200-31798800 Active TSS Cortex derived primary cultured neurospheres brain
32 chr6:31797200-31798800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
33 chr6:31797200-31798800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
34 chr6:31797200-31798800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr6:31797200-31798800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
36 chr6:31797200-31798800 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
37 chr6:31797200-31798800 Active TSS Aorta Aorta
38 chr6:31797200-31798800 Active TSS Brain Angular Gyrus brain
39 chr6:31797200-31798800 Active TSS Brain Hippocampus Middle brain
40 chr6:31797200-31798800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
41 chr6:31797200-31798800 Active TSS Brain Substantia Nigra brain
42 chr6:31797200-31798800 Active TSS Colonic Mucosa Colon
43 chr6:31797200-31798800 Active TSS Duodenum Mucosa Duodenum
44 chr6:31797200-31798800 Active TSS Fetal Adrenal Gland Adrenal Gland
45 chr6:31797200-31798800 Active TSS Fetal Intestine Large intestine
46 chr6:31797200-31798800 Active TSS Fetal Intestine Small intestine
47 chr6:31797200-31798800 Active TSS Fetal Kidney kidney
48 chr6:31797200-31798800 Active TSS Left Ventricle heart
49 chr6:31797200-31798800 Active TSS Lung lung
50 chr6:31797200-31798800 Active TSS Pancreas Pancrea

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